RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ACANP16112 2415 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 NF1P21359 2839 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 TUBAL3A6NHL2 446 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 VAMP5O95183 116 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 ZNF682O95780 498 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 SERPINA1P01009 418 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 POU2F1P14859 743 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 NCK1P16333 377 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 OR3A2P47893 321 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 P2RY4P51582 365 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 SLC17A1Q14916 467 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 EXOC3L2Q2M3D2 409 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 TFAP2EQ6VUC0 442 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 DEF8Q6ZN54 512 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 TRPM8Q7Z2W7 1104 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 VTCN1Q7Z7D3 282 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 FAM156AQ8NDB6 213 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 RBM15BQ8NDT2 890 aaKnown RBP17.69■□□□□ 0.42
COL9A3-202ENST00000452372 SLC25A36Q96CQ1 311 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 SF3B5Q9BWJ5 86 aaKnown RBP17.69■□□□□ 0.42
COL9A3-202ENST00000452372 FANCFQ9NPI8 374 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 SLC7A7Q9UM01 511 aa17.69■□□□□ 0.42
COL9A3-202ENST00000452372 FAM221AA4D161 298 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 GMNNO75496 209 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 OR5F1O95221 314 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 TAS2R41P59536 307 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 TMEM225Q6GV28 225 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 WDR88Q6ZMY6 472 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 LINC01560Q8TB33 94 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 FAM222BQ8WU58 562 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 SLC41A3Q96GZ6 507 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 GORASP2Q9H8Y8 452 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 CRIM1Q9NZV1 1036 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 RIMS3Q9UJD0 308 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 RPS6KA6Q9UK32 745 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 NOSIPQ9Y314 301 aaKnown RBP17.68■□□□□ 0.42
COL9A3-202ENST00000452372 FLVCR1Q9Y5Y0 555 aa17.68■□□□□ 0.42
COL9A3-202ENST00000452372 C16orf97H3BN30 126 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 CTAG2O75638 210 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 THRBP10828 461 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 TCN1P20061 433 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 GTF2E2P29084 291 aaKnown RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 DNAJA1P31689 397 aaKnown RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 NTF4P34130 210 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 UGT2B10P36537 528 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 LTBQ06643 244 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 PIN1Q13526 163 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 MFSD13AQ14CX5 517 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 IFI44LQ53G44 452 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 TTC33Q6PID6 262 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 GEMIN6Q8WXD5 167 aaKnown RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 PRSS27Q9BQR3 290 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 ZNF426Q9BUY5 554 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 AMBRA1Q9C0C7 1298 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 DCAF13Q9NV06 445 aaKnown RBP17.67■□□□□ 0.42
COL9A3-202ENST00000452372 RASD1Q9Y272 281 aa17.67■□□□□ 0.42
COL9A3-202ENST00000452372 BGLAPP02818 100 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 IFNW1P05000 195 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 EPXP11678 715 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 GRPRP30550 384 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 MSX2P35548 267 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-202ENST00000452372 STAC2Q6ZMT1 411 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 RINLQ6ZS11 566 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 FKBP9P1Q75LS8 142 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 GPAT4Q86UL3 456 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 ZNF100Q8IYN0 542 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 GABRG1Q8N1C3 465 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 ARHGAP24Q8N264 748 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 OR9K2Q8NGE7 335 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 HSH2DQ96JZ2 352 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 DACH2Q96NX9 599 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 SLC19A3Q9BZV2 496 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 KLHL4Q9C0H6 718 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 PARPBPQ9NWS1 579 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 NDRG3Q9UGV2 375 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 MAGEL2Q9UJ55 1249 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 B3GALT5Q9Y2C3 310 aa17.66■□□□□ 0.42
COL9A3-202ENST00000452372 M0R082 166 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 MRPL33O75394 65 aaKnown RBP17.65■□□□□ 0.42
COL9A3-202ENST00000452372 CNOT4O95628 575 aaKnown RBP17.65■□□□□ 0.42
COL9A3-202ENST00000452372 PTNP21246 168 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 EDNRAP25101 427 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 POU4F3Q15319 338 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 H1FNTQ75WM6 255 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-202ENST00000452372 TMEM200AQ86VY9 491 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 NKAIN4Q8IVV8 208 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 ZIC4Q8N9L1 334 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 ADPRHL1Q8NDY3 354 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 ZNF417Q8TAU3 575 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 TMEM45BQ96B21 275 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 APH1AQ96BI3 265 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 PRRC1Q96M27 445 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 ZNF587Q96SQ5 575 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-202ENST00000452372 C1orf21Q9H246 121 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 LIME1Q9H400 295 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 SEC14L4Q9UDX3 406 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 PRSS50Q9UI38 385 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 A4GNTQ9UNA3 340 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
COL9A3-202ENST00000452372 CORINQ9Y5Q5 1042 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms