RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CIARTQ8N365 385 aaPredicted RBP8.51□□□□□ -1.05
USP54-207ENST00000451492 C10orf53Q8N6V4 93 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 C11orf65Q8NCR3 313 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 OR10A6Q8NH74 314 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 STK35Q8TDR2 534 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 SLC26A7Q8TE54 656 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 RADILQ96JH8 1075 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 C18orf12Q96KH6 178 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
USP54-207ENST00000451492 SIKE1Q9BRV8 207 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 PTDSS2Q9BVG9 487 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 SLCO5A1Q9H2Y9 848 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ALG2Q9H553 416 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 TMEM38AQ9H6F2 299 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 DLL4Q9NR61 685 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 PARPBPQ9NWS1 579 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 ZFHX3Q15911 3703 aa8.51□□□□□ -1.05
USP54-207ENST00000451492 SHISA9B4DS77 424 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 KPNA4O00629 521 aaPredicted RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 FBP2O00757 339 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 MRASO14807 208 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 NPIPB7O75200 414 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 SERPINB7O75635 380 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 LGI1O95970 557 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 INHBBP09529 407 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 NQO1P15559 274 aaKnown RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 CR1P17927 2039 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 GRPRP30550 384 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 CLDN17P56750 224 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TUBA1BP68363 451 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TUBA4AP68366 448 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 OR1Q1Q15612 314 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TRMT5Q32P41 509 aaKnown RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 HSP90B2PQ58FF3 399 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 CARD17Q5XLA6 110 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 REP15Q6BDI9 236 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 KLHL17Q6TDP4 642 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 KLHL24Q6TFL4 600 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TMEM108Q6UXF1 575 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 CREB3L2Q70SY1 520 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TUBA1AQ71U36 451 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 DPP10Q8N608 796 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 ZIC4Q8N9L1 334 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 MFSD8Q8NHS3 518 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 SMAP2Q8WU79 429 aaPredicted RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 HTRA1Q92743 480 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 SLC38A4Q969I6 547 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TAAR8Q969N4 342 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TMEM45BQ96B21 275 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 MCHR1Q99705 422 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 SF3B5Q9BWJ5 86 aaKnown RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 TRIM2Q9C040 744 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 TMEM27Q9HBJ8 222 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 CISD1Q9NZ45 108 aaKnown RBP8.5□□□□□ -1.05
USP54-207ENST00000451492 USP22Q9UPT9 525 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 RASD1Q9Y272 281 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 SLC25A15Q9Y619 301 aa8.5□□□□□ -1.05
USP54-207ENST00000451492 ARID1AO14497 2285 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 IGKV1D-42A0A075B6H8 117 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 TRAV36DV7A0A075B6V5 113 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 A0A096LPE4 126 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 A0A1W2PPZ6 126 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 FTCDNL1E5RQL4 147 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 ZNF587BE7ETH6 402 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 PDLIM1O00151 329 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 AIM2O14862 343 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 TPST2O60704 377 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 UPK3AO75631 287 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 SEC14L2O76054 403 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 MFN2O95140 757 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 ZNF43P17038 809 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 MPGP29372 298 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 CDH12P55289 794 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 TGFBR3Q03167 851 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 KLF10Q13118 480 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 C1DQ13901 141 aaKnown RBP8.49□□□□□ -1.05
USP54-207ENST00000451492 VEZF1Q14119 521 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 DUSP7Q16829 419 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 PGGHGQ32M88 737 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 RABL3Q5HYI8 236 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 OR7E24Q6IFN5 339 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 ULK3Q6PHR2 472 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 CLEC9AQ6UXN8 241 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 B3GLCTQ6Y288 498 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 LINGO2Q7L985 606 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 ABHD12BQ7Z5M8 362 aaPredicted RBP8.49□□□□□ -1.05
USP54-207ENST00000451492 P2RY8Q86VZ1 359 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 SNX32Q86XE0 403 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 RBM45Q8IUH3 476 aaKnown RBP8.49□□□□□ -1.05
USP54-207ENST00000451492 EPHX4Q8IUS5 362 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 POU5F2Q8N7G0 328 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 LSMEM1Q8N8F7 131 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 MAPK1IP1LQ8NDC0 245 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 GPR32P1Q8NGA4 272 aa8.49□□□□□ -1.05
USP54-207ENST00000451492 DNAJA4Q8WW22 397 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms