RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TXNRD2Q9NNW7 524 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 GDE1Q9NZC3 331 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 COMMD9Q9P000 198 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 CRLS1Q9UJA2 301 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 TP53TG5Q9Y2B4 290 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ZNF337Q9Y3M9 751 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 hCG_1809904A0A1W2PP81 198 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 A0A1W2PR64 198 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 A0A1W2PRV1 198 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ZC3H12DA2A288 527 aaKnown RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 TSTD3H0UI37 97 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 KIAA0355O15063 1070 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 GPR32O75388 356 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 F2P00734 622 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 HEXBP07686 556 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ALPPL2P10696 532 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 VEGFBP49765 207 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ANXA11P50995 505 aaKnown RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 ACY1Q03154 408 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 EFEMP1Q12805 493 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 TAF13Q15543 124 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 DMKNQ6E0U4 476 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 GRHL2Q6ISB3 625 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 FIGNL1Q6PIW4 674 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 FAM83HQ6ZRV2 1179 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 OVCH1Q7RTY7 1134 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 LRRTM4Q86VH4 590 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 OR4C16Q8NGL9 310 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 OR6T1Q8NGN1 323 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 ASB11Q8WXH4 323 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 S100A16Q96FQ6 103 aaKnown RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 CHST5Q9GZS9 411 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 DUSP15Q9H1R2 295 aaPredicted RBP7.94□□□□□ -1.14
LSM5-208ENST00000450169 CXorf36Q9H7Y0 433 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 IL21RQ9HBE5 538 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 RHOFQ9HBH0 211 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 APMAPQ9HDC9 416 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 RPS10P5Q9NQ39 176 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 FOXJ3Q9UPW0 622 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 MSRB2Q9Y3D2 182 aa7.94□□□□□ -1.14
LSM5-208ENST00000450169 PTPRDP23468 1912 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 HELZP42694 1942 aaKnown RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 A0A1W2PPH5 198 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 J3QLW9 94 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 MAN2B1O00754 1011 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 MBTPS2O43462 519 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 YIF1AO95070 293 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 ZNF19P17023 458 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 NT5EP21589 574 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 ST8SIA6P61647 398 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 PKIAP61925 76 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 RPS13P62277 151 aaKnown RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 ARHGAP1Q07960 439 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 ZNF234Q14588 700 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 INPP5JQ15735 1006 aaPredicted RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 PRSS53Q2L4Q9 553 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 PCGF3Q3KNV8 242 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 VWA2Q5GFL6 755 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 SDHAF4Q5VUM1 108 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 ADAM5Q6NVV9 412 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 NIPAL3Q6P499 406 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 LBX2Q6XYB7 198 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 FCRLAQ7L513 359 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 COMMD6Q7Z4G1 85 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 CFAP52Q8N1V2 620 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 STEAP2Q8NFT2 490 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 TFGQ92734 400 aaPredicted RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 NKD1Q969G9 470 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 ISOC2Q96AB3 205 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 C3orf49Q96BT1 292 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 NEURL3Q96EH8 262 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 NECAB3Q96P71 396 aaPredicted RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 ACBD6Q9BR61 282 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 MRPL37Q9BZE1 423 aaKnown RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 EXO5Q9H790 373 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 MIEF1Q9NQG6 463 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 SEMA4GQ9NTN9 838 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 GAR1Q9NY12 217 aaKnown RBP7.93□□□□□ -1.14
LSM5-208ENST00000450169 FBXL4Q9UKA2 621 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 BRCA2P51587 3418 aa7.93□□□□□ -1.14
LSM5-208ENST00000450169 TRBV5-4A0A0C4DH59 114 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 IFITM10A6NMD0 228 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 SULT2B1O00204 365 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 NARSO43776 548 aaKnown RBP7.92□□□□□ -1.14
LSM5-208ENST00000450169 F11P03951 625 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 CD74P04233 296 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 HOXB5P09067 269 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 TPT1P13693 172 aaKnown RBP7.92□□□□□ -1.14
LSM5-208ENST00000450169 HOXA5P20719 270 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 DPP4P27487 766 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 ADH6P28332 368 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 PDHA2P29803 388 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 PYCR1P32322 319 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 MAGEB1P43366 347 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 CDX1P47902 265 aaPredicted RBP7.92□□□□□ -1.14
LSM5-208ENST00000450169 CSNK1DP48730 415 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 CAV2P51636 162 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 PPP2CBP62714 309 aa7.92□□□□□ -1.14
LSM5-208ENST00000450169 PPP2CAP67775 309 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms