RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 OR6T1Q8NGN1 323 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RNF217Q8TC41 542 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RCN3Q96D15 328 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 TMEM204Q9BSN7 226 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 SEC14L4Q9UDX3 406 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 MALT1Q9UDY8 824 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 RASD1Q9Y272 281 aa11.23□□□□□ -0.61
PRPF40A-203ENST00000448428 TRAV36DV7A0A075B6V5 113 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 CIB4A0PJX0 185 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 OR5H1A6NKK0 313 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 PDLIM1O00151 329 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 OR2T1O43869 369 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 FMO6PO60774 539 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 FZD7O75084 574 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 RAD51DO75771 328 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 ITGA5P08648 1049 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 COX4I1P13073 169 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 LTBQ06643 244 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 VEZF1Q14119 521 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 PPA1Q15181 289 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 GABRA6Q16445 453 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 ENTPD8Q5MY95 495 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 TIMM23BQ5SRD1 257 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 FAM69AQ5T7M9 428 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF613Q6PF04 617 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 C5orf46Q6UWT4 87 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF704Q6ZNC4 412 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 SPATA21Q7Z572 469 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 P2RY8Q86VZ1 359 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 EPHX4Q8IUS5 362 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 VANGL1Q8TAA9 524 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 MUCL1Q96DR8 90 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 MUS81Q96NY9 551 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 ALPK1Q96QP1 1244 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 NGBQ9NPG2 151 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 TAS2R16Q9NYV7 291 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 UPB1Q9UBR1 384 aa11.22□□□□□ -0.61
PRPF40A-203ENST00000448428 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 CPSF4LA6NMK7 179 aaKnown RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 M0R082 166 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 AIM2O14862 343 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 LYPD3O95274 346 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 THY1P04216 161 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 PTNP21246 168 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 CBLP22681 906 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 GRPRP30550 384 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 SELENOPP49908 381 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 C9orf135Q5VTT2 229 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 ERICH5Q6P6B1 374 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 TSPYL5Q86VY4 417 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 LILRB1Q8NHL6 650 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF417Q8TAU3 575 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 PIGTQ969N2 578 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 OXGR1Q96P68 337 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 ZNF587Q96SQ5 575 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 TMEM43Q9BTV4 400 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 ESRP2Q9H6T0 727 aaKnown RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 BEX4Q9NWD9 120 aaPredicted RBP11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 CMTM6Q9NX76 183 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 B3GAT1Q9P2W7 334 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 B3GALT5Q9Y2C3 310 aa11.21□□□□□ -0.61
PRPF40A-203ENST00000448428 A0A1W2PR80 420 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 FAM220BPB1ANY3 271 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 MS4A18H0YCH9 400 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 BGLAPP02818 100 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 DRD4P21917 467 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 GTF2E2P29084 291 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 GYS2P54840 703 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 CLDN17P56750 224 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 BSPH1Q075Z2 132 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 LGALS3BPQ08380 585 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 MS4A18Q3C1V0 323 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 SWT1Q5T5J6 900 aaKnown RBP11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 OR7E24Q6IFN5 339 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 WDR88Q6ZMY6 472 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 C20orf204Q6ZNR8 217 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 H1FNTQ75WM6 255 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 SLC15A3Q8IY34 581 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 POMGNT2Q8NAT1 580 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 OR6S1Q8NH40 331 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 OR52N5Q8NH56 324 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 ADAMTS16Q8TE57 1224 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 AKAP1Q92667 903 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 MOGAT1Q96PD6 335 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 EPYCQ99645 322 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 AMBRA1Q9C0C7 1298 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 FAM107BQ9H098 131 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 PCDHAC1Q9H158 963 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 MYLK2Q9H1R3 596 aa11.2□□□□□ -0.62
PRPF40A-203ENST00000448428 NPAP1Q9NZP6 1156 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms