RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 LINGO2Q7L985 606 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 CROCCP2Q86T23 111 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 OR1K1Q8NGR3 316 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 ITCHQ96J02 903 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 SPATA9Q9BWV2 254 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 RMND5AQ9H871 391 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 SDR39U1Q9NRG7 319 aaPredicted RBP24.68■■□□□ 1.54
CBX4-202ENST00000448310 TMEM45AQ9NWC5 275 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 ZIM2Q9NZV7 527 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 PMF1-BGLAPU3KQ54 211 aa24.68■■□□□ 1.54
CBX4-202ENST00000448310 MALRD1Q5VYJ5 2156 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 RNF212BA8MTL3 300 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 SLCO1B7G3V0H7 640 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 IFNA2P01563 188 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 NUDT7P0C024 238 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 BMP4P12644 408 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 TUBA1BP68363 451 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 TUBA4AP68366 448 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 VLDLRP98155 873 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 MST1LQ2TV78 715 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 NIPAL3Q6P499 406 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 TUBA1AQ71U36 451 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 ABHD12BQ7Z5M8 362 aaPredicted RBP24.67■■□□□ 1.54
CBX4-202ENST00000448310 EPHX4Q8IUS5 362 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 KDM8Q8N371 416 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 PIF1Q9H611 641 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 ZNF232Q9UNY5 417 aa24.67■■□□□ 1.54
CBX4-202ENST00000448310 A0A0G2JPF8 293 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 TMEM229AB2RXF0 380 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 HNRNPCL2B2RXH8 293 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 HNRNPCL3B7ZW38 293 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 ZNF587BE7ETH6 402 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 NR5A2O00482 541 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 HNRNPCL1O60812 293 aaKnown RBP24.66■■□□□ 1.54
CBX4-202ENST00000448310 NPIPB7O75200 414 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 UPK3AO75631 287 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 HNRNPCL4P0DMR1 293 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 POLR2JP52435 117 aaKnown RBP24.66■■□□□ 1.54
CBX4-202ENST00000448310 SLC25A36Q96CQ1 311 aa24.66■■□□□ 1.54
CBX4-202ENST00000448310 CACYBPQ9HB71 228 aaKnown RBP24.66■■□□□ 1.54
CBX4-202ENST00000448310 UBDO15205 165 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 VAMP5O95183 116 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 AHSA1O95433 338 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 SWI5Q1ZZU3 235 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 ZNF311Q5JNZ3 666 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 C1QTNF12Q5T7M4 302 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 MSANTD1Q6ZTZ1 278 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 MAL2Q969L2 176 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 BOD1Q96IK1 185 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 SLC38A2Q96QD8 506 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 OBP2BQ9NPH6 170 aa24.65■■□□□ 1.54
CBX4-202ENST00000448310 A0A096LPE4 126 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 A0A1W2PPZ6 126 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 TMEM247A6NEH6 219 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 ZNF16P17020 682 aaPredicted RBP24.64■■□□□ 1.54
CBX4-202ENST00000448310 RPS5P46782 204 aaKnown RBP24.64■■□□□ 1.54
CBX4-202ENST00000448310 ZSWIM7Q19AV6 140 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 SLC2A7Q6PXP3 512 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 STK35Q8TDR2 534 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 BCL2L2Q92843 193 aaPredicted RBP24.64■■□□□ 1.54
CBX4-202ENST00000448310 SORCS2Q96PQ0 1159 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 KCNK17Q96T54 332 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 PTDSS2Q9BVG9 487 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 SEC14L4Q9UDX3 406 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 PRDM4Q9UKN5 801 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 RASD1Q9Y272 281 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 PCDHB14Q9Y5E9 798 aa24.64■■□□□ 1.54
CBX4-202ENST00000448310 A0A096LPI6 279 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 FTCDNL1E5RQL4 147 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 F12P00748 615 aaPredicted RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 CSF3P09919 207 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 IGHV4-31P0DP07 118 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 PNMTP11086 282 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 UBE2NP61088 152 aaKnown RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 MAGOHP61326 146 aaKnown RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 EGR4Q05215 589 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 RGNQ15493 299 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 PHC2Q8IXK0 858 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 MIER2Q8N344 545 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 GTF2H4Q92759 462 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 PROX1Q92786 737 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 KTI12Q96EK9 354 aaPredicted RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 KCNS3Q9BQ31 491 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 PAIP1Q9H074 479 aaKnown RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 NELFAQ9H3P2 528 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 ARMC7Q9H6L4 198 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 SEC61A2Q9H9S3 476 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 THUMPD1Q9NXG2 353 aaKnown RBP24.63■■□□□ 1.53
CBX4-202ENST00000448310 NKIRAS1Q9NYS0 192 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 IFT52Q9Y366 437 aa24.63■■□□□ 1.53
CBX4-202ENST00000448310 USF1P22415 310 aaPredicted RBP24.62■■□□□ 1.53
CBX4-202ENST00000448310 CLDN17P56750 224 aa24.62■■□□□ 1.53
CBX4-202ENST00000448310 MFSD8Q8NHS3 518 aa24.62■■□□□ 1.53
CBX4-202ENST00000448310 CLIC1O00299 241 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 FAM157CP0CG43 387 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 SNRPD2P62316 118 aaKnown RBP24.61■■□□□ 1.53
CBX4-202ENST00000448310 ROR2Q01974 943 aaKnown RBP24.61■■□□□ 1.53
CBX4-202ENST00000448310 CYB5R2Q6BCY4 276 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 VHLLQ6RSH7 139 aa24.61■■□□□ 1.53
CBX4-202ENST00000448310 ANKS4BQ8N8V4 417 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms