RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 POM121Q96HA1 1249 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 ZNF347Q96SE7 839 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 MCHR1Q99705 422 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 CHID1Q9BWS9 393 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 ENKD1Q9H0I2 346 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 PIGMQ9H3S5 423 aa12.6□□□□□ -0.39
SREBF1-207ENST00000447641 IGKV1D-42A0A075B6H8 117 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 A0A087WUJ7 227 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 LIPT2A6NK58 231 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 FAM90A27PA6NNH2 459 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 GNGT2O14610 69 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 THY1P04216 161 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 KLK2P20151 261 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 PCYT1AP49585 367 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 CDH12P55289 794 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 PDK3Q15120 406 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 TRIP10Q15642 601 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 ATP6AP1Q15904 470 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 IFI44LQ53G44 452 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 SPNS3Q6ZMD2 512 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 FAM214BQ7L5A3 538 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 CYP4Z1Q86W10 505 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 ABHD3Q8WU67 409 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 EME1Q96AY2 570 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 SEPHS2Q99611 448 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 C9orf16Q9BUW7 83 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 KLHL4Q9C0H6 718 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 Q9H521 79 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 BCO1Q9HAY6 547 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 TMEM27Q9HBJ8 222 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 RPS6KB2Q9UBS0 482 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
SREBF1-207ENST00000447641 FAM32AQ9Y421 112 aaKnown RBP12.59□□□□□ -0.39
SREBF1-207ENST00000447641 IGKV3D-15A0A087WSY6 115 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-207ENST00000447641 A8MXE2 369 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF814B7Z6K7 855 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 H3BNX3 289 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 MSTNO14793 375 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 PRKD3O94806 890 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 FABP3P05413 133 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 CD8BP10966 210 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ERFP50548 548 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ASCL1P50553 236 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 SLC35A1P78382 337 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ALG10BQ5I7T1 473 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ENTPD8Q5MY95 495 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 C1orf140Q5VVS0 124 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 VWA1Q6PCB0 445 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 CARM1Q86X55 608 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 SVOPLQ8N434 492 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 PTDSS2Q9BVG9 487 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 POLR2J2Q9GZM3 115 aaKnown RBP12.58□□□□□ -0.4
SREBF1-207ENST00000447641 POLR2J3Q9H1A7 115 aaKnown RBP12.58□□□□□ -0.4
SREBF1-207ENST00000447641 IL1RAPQ9NPH3 570 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 KLHL13Q9P2N7 655 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 DNAJB9Q9UBS3 223 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
SREBF1-207ENST00000447641 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.4
SREBF1-207ENST00000447641 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 IGHV3-15A0A0B4J1V0 119 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 TRAPPC13A5PLN9 417 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 FTCDNL1E5RQL4 147 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 H0YJX3 145 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 CLOCKO15516 846 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 YES1P07947 543 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 TNFRSF1BP20333 461 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 FPR1P21462 350 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 AGTR1P30556 359 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 IDUAP35475 653 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 P2RY4P51582 365 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 SLC16A1P53985 500 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 OR2B6P58173 313 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 SMIM11AP58511 58 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 PAQR6Q6TCH4 344 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 PIWIL3Q7Z3Z3 882 aaKnown RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 ICA1LQ8NDH6 482 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 OR6S1Q8NH40 331 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 MFSD8Q8NHS3 518 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 VANGL1Q8TAA9 524 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 RNASE6Q93091 150 aaKnown RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
SREBF1-207ENST00000447641 TPD52L3Q96J77 140 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 PSD2Q9BQI7 771 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 ZNF426Q9BUY5 554 aa12.57□□□□□ -0.4
SREBF1-207ENST00000447641 FOXD3Q9UJU5 478 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms