RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZNF684Q5T5D7 378 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 PWWP2BQ6NUJ5 590 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 KIRREL2Q6UWL6 708 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 APOOLQ6UXV4 268 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 OR52R1Q8NGF1 315 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 OR5T3Q8NGG3 340 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 GCDHQ92947 438 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ANKRD9Q96BM1 317 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 CLIP3Q96DZ5 547 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 HSPA12BQ96MM6 686 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 NOX3Q9HBY0 568 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 TAS2R5Q9NYW4 299 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ACTR10Q9NZ32 417 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 PLSCR5A0PG75 271 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ACOD1A6NK06 481 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ARPC1BO15143 372 aaKnown RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 KHDRBS3O75525 346 aaKnown RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 SCO1O75880 301 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 TPPPO94811 219 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 IFNA16P05015 189 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 IL5P05113 134 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 CA13Q8N1Q1 262 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 C7orf57Q8NEG2 295 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 C15orf40Q8WUR7 153 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 RGP1Q92546 391 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 NSMAFQ92636 917 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 RNF166Q96A37 237 aaPredicted RBP17.48■□□□□ 0.39
SDCBP-204ENST00000447182 ORAI1Q96D31 301 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 HAVCR1Q96D42 359 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 MSANTD3Q96H12 275 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 NMNAT3Q96T66 252 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 TMPRSS13Q9BYE2 586 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 SLC25A18Q9H1K4 315 aa17.48■□□□□ 0.39
SDCBP-204ENST00000447182 A6NCN8 305 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 OR6C68A6NDL8 312 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 POM121BA6NF01 834 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 GALR3O60755 368 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 PPM1BO75688 479 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 OR2A4O95047 310 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 LDOC1O95751 146 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 SLC35E2P0CK97 266 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 RAD52P43351 418 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF141Q15928 474 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 NHLRC3Q5JS37 347 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 GPAT4Q86UL3 456 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF433Q8N7K0 673 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 OR2A7Q96R45 310 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 CDCP1Q9H5V8 836 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 MGAT4CQ9UBM8 478 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 PPIEQ9UNP9 301 aaKnown RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TICRRQ7Z2Z1 1910 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 A0A087WUJ7 227 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3DA0A087WVF3 549 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3IA0A087WXS9 549 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 SNRPGP15A8MWD9 76 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3LB9A6J9 549 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ACOT7O00154 380 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ZFPL1O95159 310 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 IGKV1D-16P01601 117 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3HP0C7X1 549 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 RPL4P36578 427 aaKnown RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 P2RX1P51575 399 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 NANOS3P60323 173 aaKnown RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 RAP2BP61225 183 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TAGLNQ01995 201 aaKnown RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 BAMBIQ13145 260 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 SLC6A19Q695T7 634 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3CQ6IPX1 549 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 SLC25A25Q6KCM7 469 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ENPP7Q6UWV6 458 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 DNM1P46Q6ZS02 220 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TBC1D3Q8IZP1 549 aaPredicted RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 SYNPRQ8TBG9 265 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 PCNPQ8WW12 178 aaKnown RBP17.47■□□□□ 0.39
SDCBP-204ENST00000447182 FAM3CQ92520 227 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 C12orf10Q9HB07 376 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF224Q9NZL3 707 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 OR5V1Q9UGF6 321 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 ETV7Q9Y603 341 aa17.47■□□□□ 0.39
SDCBP-204ENST00000447182 TRBV23OR9-2A0A075B6M9 112 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 GLCEO94923 617 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 S1PR1P21453 382 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ACTR1BP42025 376 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ACTR1AP61163 376 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 RPS4XP62701 263 aaKnown RBP17.46■□□□□ 0.39
SDCBP-204ENST00000447182 STX4Q12846 297 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 TCEA2Q15560 299 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ZNHIT3Q15649 155 aaPredicted RBP17.46■□□□□ 0.39
SDCBP-204ENST00000447182 TMEM69Q5SWH9 247 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ZNF626Q68DY1 528 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.39
SDCBP-204ENST00000447182 KIAA1324Q6UXG2 1013 aaKnown RBP17.46■□□□□ 0.39
SDCBP-204ENST00000447182 DGAT2L6Q6ZPD8 337 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 SERPINA12Q8IW75 414 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 CCL4L1Q8NHW4 92 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 THEM6Q8WUY1 208 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 ASB12Q8WXK4 309 aa17.46■□□□□ 0.39
SDCBP-204ENST00000447182 RBPMSQ93062 196 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms