RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ULK3Q6PHR2 472 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 FAM198BQ6UWH4 519 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 SLC38A6Q8IZM9 456 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 YIPF5Q969M3 257 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 ZC3HAV1LQ96H79 300 aaKnown RBP10.93□□□□□ -0.66
MSH6-204ENST00000445503 SFXN2Q96NB2 322 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 ADGRL4Q9HBW9 690 aa10.93□□□□□ -0.66
MSH6-204ENST00000445503 LAMA2P24043 3122 aaKnown RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 LEUTXA8MZ59 168 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 DCTDP32321 178 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 LIMK1P53667 647 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 SKP1P63208 163 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 GARNL3Q5VVW2 1013 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 KIAA0907Q7Z7F0 614 aaPredicted RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 IQCF2Q8IXL9 164 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 DEFB119Q8N690 84 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 DVL3Q92997 716 aaPredicted RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 ALG12Q9BV10 488 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 PRDM9Q9NQV7 894 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 ING1Q9UK53 422 aaPredicted RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 CES1P1Q9UKY3 287 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 COPS3Q9UNS2 423 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 GPR89AB7ZAQ6 455 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 IMPA2O14732 288 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 RP2O75695 350 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 GPR89BP0CG08 455 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 GAS1P54826 345 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 KIR2DS3Q14952 304 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 CDK5R1Q15078 307 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 PLA1AQ53H76 456 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 UBE2NLQ5JXB2 153 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 OR52B4Q8NGK2 314 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 HRASLSQ9HDD0 168 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 CD93Q9NPY3 652 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 FBXL21Q9UKT6 434 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 ZNF281Q9Y2X9 895 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 SCDO00767 359 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 EIF1AYO14602 144 aaKnown RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 PLPP2O43688 288 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 AK1P00568 194 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 THBS1P07996 1170 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 PEBP1P30086 187 aaKnown RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 NTSR1P30989 418 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 NUP62P37198 522 aaPredicted RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 GNALP38405 381 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 DNASE1L1P49184 302 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 CCR9P51686 369 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 AKR1D1P51857 326 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 ZNF136P52737 540 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 BDH1Q02338 343 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 GRM7Q14831 915 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 AKIRIN2Q53H80 203 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 HEPHL1Q6MZM0 1159 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 OR11H4Q8NGC9 324 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 ZNF707Q96C28 371 aaPredicted RBP10.92□□□□□ -0.66
MSH6-204ENST00000445503 KIR3DX1Q9H7L2 352 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
MSH6-204ENST00000445503 PLXNA4Q9HCM2 1894 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 A0A1B0GTH9 108 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 LINC01553A4QN01 128 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 BHLHE40O14503 412 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 HCRTR2O43614 444 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 EIF1AXP47813 144 aaKnown RBP10.91□□□□□ -0.66
MSH6-204ENST00000445503 KCNAB1Q14722 419 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 BAIAP2L2Q6UXY1 529 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 SLC35D2Q76EJ3 337 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 SMIM19Q96E16 107 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 ZMAT3Q9HA38 289 aaKnown RBP10.91□□□□□ -0.66
MSH6-204ENST00000445503 MEPEQ9NQ76 525 aaPredicted RBP10.91□□□□□ -0.66
MSH6-204ENST00000445503 LRIT1Q9P2V4 623 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 CKLFQ9UBR5 152 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 CDC14CA4D256 554 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 CT62P0C5K7 136 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 ANKRD34CP0C6C1 535 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 CXCR1P25024 350 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 AKT2P31751 481 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 SELENOPP49908 381 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 ARFIP1P53367 373 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 TAF13Q15543 124 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 ALG10Q5BKT4 473 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 LAMTOR1Q6IAA8 161 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 KIRREL2Q6UWL6 708 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 NLRC3Q7RTR2 1065 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 DPY19L4Q7Z388 723 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 KRT77Q7Z794 578 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 LSM14AQ8ND56 463 aaKnown RBP10.91□□□□□ -0.66
MSH6-204ENST00000445503 SYNDIG1Q9H7V2 258 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 PPM1BO75688 479 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 CASTOR1Q8WTX7 329 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 METTL21AQ8WXB1 218 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 GSX2Q9BZM3 304 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 DUSP22Q9NRW4 184 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 PLEKHA6Q9Y2H5 1048 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 SLC22A7Q9Y694 548 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 PLATP00750 562 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 TPOP07202 933 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 EEF1A1P68104 462 aaKnown RBP10.91□□□□□ -0.66
MSH6-204ENST00000445503 GSG1Q2KHT4 349 aa10.91□□□□□ -0.66
MSH6-204ENST00000445503 FAM69AQ5T7M9 428 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms