RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 NAA11Q9BSU3 229 aaPredicted RBP14.25□□□□□ -0.13
USP39-205ENST00000442708 FNDC11Q9BVV2 318 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 C12orf49Q9H741 205 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 BCO1Q9HAY6 547 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 KCNJ16Q9NPI9 418 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 GLRX2Q9NS18 164 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 KLHL9Q9P2J3 617 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 POMPQ9Y244 141 aa14.25□□□□□ -0.13
USP39-205ENST00000442708 OR2T1O43869 369 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 SMNDC1O75940 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP39-205ENST00000442708 CH25HO95992 272 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 YES1P07947 543 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 RBM34P42696 430 aaKnown RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 RASSF2P50749 326 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 SLC16A1P53985 500 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 TRAM2Q15035 370 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 PDK3Q15120 406 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 MTX3Q5HYI7 312 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 ZNF474Q6S9Z5 364 aaPredicted RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 TBPL2Q6SJ96 375 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 CCDC121Q6ZUS5 278 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 SLC46A3Q7Z3Q1 461 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 LUZP2Q86TE4 346 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 MEX3DQ86XN8 651 aaKnown RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 ZDHHC21Q8IVQ6 265 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 KDM8Q8N371 416 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 LRRC17Q8N6Y2 441 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 ZIC4Q8N9L1 334 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 ZNF610Q8N9Z0 462 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 PIK3C3Q8NEB9 887 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 OR6K3Q8NGY3 331 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 MCUR1Q96AQ8 359 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 DHRS1Q96LJ7 313 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 EPYCQ99645 322 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 SLC19A3Q9BZV2 496 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 PIGMQ9H3S5 423 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 NMNAT1Q9HAN9 279 aaPredicted RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 GP6Q9HCN6 339 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 IL1RAPQ9NPH3 570 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 PLEKHB1Q9UF11 243 aaPredicted RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 EMC9Q9Y3B6 208 aa14.24□□□□□ -0.13
USP39-205ENST00000442708 KLF2Q9Y5W3 355 aaPredicted RBP14.24□□□□□ -0.13
USP39-205ENST00000442708 A0A087WUU8 490 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ENO4A6NNW6 628 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ZNF724A8MTY0 619 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 A8MXE2 369 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 PRSS44E7EML9 344 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 MS4A18H0YCH9 400 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 EBAG9O00559 213 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 HPRP00739 348 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 FABP3P05413 133 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 RHCEP18577 417 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ERFP50548 548 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ASCL1P50553 236 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ZNF74Q16587 644 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 MS4A18Q3C1V0 323 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 ADGRG5Q8IZF4 528 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 C10orf53Q8N6V4 93 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 UTP4Q969X6 686 aaKnown RBP14.23□□□□□ -0.13
USP39-205ENST00000442708 PIP5K1AQ99755 562 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 FUZQ9BT04 418 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 CHST11Q9NPF2 352 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 B3GAT1Q9P2W7 334 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 TESMINQ9Y4I5 508 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 FLVCR1Q9Y5Y0 555 aa14.23□□□□□ -0.13
USP39-205ENST00000442708 MSTNO14793 375 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 CD8BP10966 210 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 FUT1P19526 365 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 MAGEA2P43356 314 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 SNTB1Q13884 538 aaKnown RBP14.22□□□□□ -0.13
USP39-205ENST00000442708 SEC23BQ15437 767 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 FBXL19-AS1Q494R0 122 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 TMEM201Q5SNT2 666 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 EEF1A1P5Q5VTE0 462 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 CRYBG3Q68DQ2 2970 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 PODNL1Q6PEZ8 512 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 TFAP2EQ6VUC0 442 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 H1FNTQ75WM6 255 aaPredicted RBP14.22□□□□□ -0.13
USP39-205ENST00000442708 PIWIL3Q7Z3Z3 882 aaKnown RBP14.22□□□□□ -0.13
USP39-205ENST00000442708 CYP4Z1Q86W10 505 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 OR9K2Q8NGE7 335 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 SLC7A13Q8TCU3 470 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 LRGUKQ96M69 825 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 HS6ST2Q96MM7 605 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 ZNF385AQ96PM9 386 aaKnown RBP14.22□□□□□ -0.13
USP39-205ENST00000442708 PROCRQ9UNN8 238 aa14.22□□□□□ -0.13
USP39-205ENST00000442708 FAM32AQ9Y421 112 aaKnown RBP14.22□□□□□ -0.13
USP39-205ENST00000442708 TRBV4-1A0A0J9YWV2 114 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 A0A1W2PRQ8 180 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 AQP12BA6NM10 295 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 PLPP3O14495 311 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 MT-ATP6P00846 226 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 H1F0P07305 194 aaKnown RBP14.21□□□□□ -0.13
USP39-205ENST00000442708 HLA-DOBP13765 273 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 IGFBP2P18065 325 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 MAKP20794 623 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 DGCR6Q14129 220 aa14.21□□□□□ -0.13
USP39-205ENST00000442708 FLOT2Q14254 428 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms