RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 RLN3Q8WXF3 142 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 SORCS2Q96PQ0 1159 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 DERL3Q96Q80 235 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 DDOQ99489 341 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 GFI1Q99684 422 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 PDCD1LG2Q9BQ51 273 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 C20orf85Q9H1P6 137 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 DLL4Q9NR61 685 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 ANKRD10Q9NXR5 420 aa15.02□□□□□ -0.01
CLCNKA-203ENST00000439316 C10orf142B7Z368 130 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 PIN1P1O15428 100 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ICMTO60725 284 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ADRB1P08588 477 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 S1PR1P21453 382 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 SRP54P61011 504 aaKnown RBP15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM53BQ14153 422 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 FGFBP1Q14512 234 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 PON3Q15166 354 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 SLC35D3Q5M8T2 416 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM199XQ6PEV8 388 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF550Q7Z398 422 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM160A2Q8N612 972 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 CSNK1A1LQ8N752 337 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 NPEPL1Q8NDH3 523 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNRF4Q8WWF5 429 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 GPR174Q9BXC1 333 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 CAPN10Q9HC96 672 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 NOX4Q9NPH5 578 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 MKKSQ9NPJ1 570 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 SCP2D1Q9UJQ7 156 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ADAM18Q9Y3Q7 739 aa15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 ARHGEF17Q96PE2 2063 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-203ENST00000439316 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 C2orf74A8MZ97 194 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 NPIPB9F8W1W9 429 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 TNFRSF10CO14798 259 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SELENOFO60613 162 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 AKT2P31751 481 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 AP2S1P53680 142 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 ZP1P60852 638 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 HSF2Q03933 536 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNF141Q15928 474 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 FAM69AQ5T7M9 428 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 MTFR2Q6P444 385 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SEZ6L2Q6UXD5 910 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 DPY19L2P2Q6ZN68 376 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 RFPL4BQ6ZWI9 263 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 BEST4Q8NFU0 473 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 OR4N2Q8NGD1 307 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SUN5Q8TC36 379 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SLC25A38Q96DW6 304 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 MRPL48Q96GC5 212 aaKnown RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 NMNAT2Q9BZQ4 307 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 WSB2Q9NYS7 404 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 EIF3KQ9UBQ5 218 aaKnown RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 FANCMQ8IYD8 2048 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SDK1Q7Z5N4 2213 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 A0A0J9YY10 115 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SHOXO15266 292 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 OR10H2O60403 315 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 PEX14O75381 377 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SPI1P17947 270 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 SRMP19623 302 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 PSMB10P40306 273 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 CCR9P51686 369 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 GPR143P51810 404 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 ZNHIT3Q15649 155 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 ZSWIM7Q19AV6 140 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 LGALSLQ3ZCW2 172 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 KIAA0895LQ68EN5 471 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
CLCNKA-203ENST00000439316 RPS6KB2Q9UBS0 482 aa15□□□□□ -0.01
CLCNKA-203ENST00000439316 ABCA7Q8IZY2 2146 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 IFITM5A6NNB3 132 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 AIPO00170 330 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 PDCD5O14737 125 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 GNB5O14775 395 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 KHNYNO15037 678 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 ARPC3O15145 178 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 FOXS1O43638 330 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 SSNA1O43805 119 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 TMEM127O75204 238 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 RDH16O75452 317 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 SDHBP21912 280 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 DNASE1P24855 282 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 DPP4P27487 766 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 ISXQ2M1V0 245 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 ALG11Q2TAA5 492 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 TOR2AQ5JU69 321 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 LINGO2Q7L985 606 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 OR11G2Q8NGC1 345 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 ZPLD1Q8TCW7 415 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 DACT3Q96B18 629 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 HSPA12BQ96MM6 686 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 VSTM2LQ96N03 204 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 NMNAT3Q96T66 252 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 HRASLSQ9HDD0 168 aa14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 AKAP7Q9P0M2 348 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-203ENST00000439316 RCE1Q9Y256 329 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms