RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 NRSN1Q8IZ57 195 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 MUC20Q8N307 709 aaPredicted RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 TEX19Q8NA77 164 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 KCT2Q8NC54 265 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF681Q96N22 645 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ADAT1Q9BUB4 502 aaKnown RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 APOBEC3BQ9UH17 382 aaKnown RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ADAM29Q9UKF5 820 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 SLC35A3Q9Y2D2 325 aa12.45□□□□□ -0.42
PCNX3-202ENST00000439247 ARID1BQ8NFD5 2236 aaPredicted RBP12.45□□□□□ -0.42
PCNX3-202ENST00000439247 TMEM272A0A1B0GTI8 110 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 C17orf113A0A1B0GUU1 675 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 A0A1B0GVT2 93 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 TRAPPC13A5PLN9 417 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PRR32B1ATL7 298 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 MTRF1O75570 445 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ARL6IP5O75915 188 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ERGP11308 486 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PPP3CBP16298 524 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 SOX2P48431 317 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ERVK-25P63136 954 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 MLF2Q15773 248 aaPredicted RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 C12orf40Q86WS4 652 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ZPLD1Q8TCW7 415 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PTCHD1Q96NR3 888 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PLEKHM1Q9Y4G2 1056 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 OR52A4PA6NMU1 304 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 OGG1O15527 345 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 CLEC3AO75596 197 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 RPP14O95059 124 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 LYPD3O95274 346 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 CPN1P15169 458 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 C4BPBP20851 252 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 EEF1A1P68104 462 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 TRMT12Q53H54 448 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 BEX5Q5H9J7 111 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 MFSD12Q6NUT3 480 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 DVL3Q92997 716 aaPredicted RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PNPLA2Q96AD5 504 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 LINC00615Q96LM1 132 aaPredicted RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 TRPV4Q9HBA0 871 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 A0A1B0GTH9 108 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 HPP00738 406 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 NGFRP08138 427 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 HIST1H1CP16403 213 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF3P17036 446 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 CD53P19397 219 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 BTN3A2P78410 334 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF77Q15935 545 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PWWP2BQ6NUJ5 590 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ZC3H14Q6PJT7 736 aaKnown RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 CDH26Q8IXH8 852 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 TMEFF1Q8IYR6 380 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF614Q8N883 585 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 OR5M9Q8NGP3 310 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 RGP1Q92546 391 aaPredicted RBP12.44□□□□□ -0.42
PCNX3-202ENST00000439247 FGF13Q92913 245 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PRO3102Q9H379 93 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 SFXN1Q9H9B4 322 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 PLEKHA1Q9HB21 404 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 MED9Q9NWA0 146 aa12.44□□□□□ -0.42
PCNX3-202ENST00000439247 ADAM11O75078 769 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 NDUFB6O95139 128 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 PRDX1Q06830 199 aaKnown RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ODF4Q2M2E3 257 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 SLC6A19Q695T7 634 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 OR8K3Q8NH51 312 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ZNF764Q96H86 408 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 SDF2Q99470 211 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 MNTQ99583 582 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 WDR13Q9H1Z4 485 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ADAP2Q9NPF8 381 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 INPP5EQ9NRR6 644 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 H0YC42 278 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ECDO95905 644 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 PLAURQ03405 335 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 STX4Q12846 297 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 FAM78AQ5JUQ0 283 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 C11orf88Q6PI97 169 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 OVCH1Q7RTY7 1134 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 HSD17B13Q7Z5P4 300 aaPredicted RBP12.43□□□□□ -0.42
PCNX3-202ENST00000439247 ZAR1Q86SH2 424 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 OR10K1Q8NGX5 313 aa12.43□□□□□ -0.42
PCNX3-202ENST00000439247 OR8S1Q8NH09 359 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms