RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 MS4A18H0YCH9 400 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 M0R082 166 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 PDLIM1O00151 329 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 NCK1P16333 377 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 COX5AP20674 150 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 GRPRP30550 384 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 PSME3P61289 254 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 MS4A18Q3C1V0 323 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 LRRC23Q53EV4 343 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 TSPO2Q5TGU0 170 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF613Q6PF04 617 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 LINGO2Q7L985 606 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 TSEN54Q7Z6J9 526 aaKnown RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 VTCN1Q7Z7D3 282 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 CDH24Q86UP0 819 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 RANBP3LQ86VV4 465 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF100Q8IYN0 542 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF433Q8N7K0 673 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF417Q8TAU3 575 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 RNF217Q8TC41 542 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 SLC26A7Q8TE54 656 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF587Q96SQ5 575 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 HOPXQ9BPY8 73 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 NAA11Q9BSU3 229 aaPredicted RBP11.71□□□□□ -0.53
LINC00399-201ENST00000439008 SLC7A10Q9NS82 523 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 EMC3Q9P0I2 261 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 SLC13A4Q9UKG4 626 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 GPR52Q9Y2T5 361 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.53
LINC00399-201ENST00000439008 TRAV36DV7A0A075B6V5 113 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 GPR171O14626 319 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 CHP2O43745 196 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 PLAUP00749 431 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 ITGA5P08648 1049 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 HLA-DOBP13765 273 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 DNAJA1P31689 397 aaKnown RBP11.7□□□□□ -0.54
LINC00399-201ENST00000439008 NCALDP61601 193 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
LINC00399-201ENST00000439008 ITGADQ13349 1161 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 TAB1Q15750 504 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 FAM69AQ5T7M9 428 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 FBXW9Q5XUX1 488 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 CASP12Q6UXS9 341 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 CREB3L2Q70SY1 520 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 ARPINQ7Z6K5 226 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 GPAT4Q86UL3 456 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 NKAIN4Q8IVV8 208 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 FITM2Q8N6M3 262 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 RNF148Q8N7C7 305 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 FAM156AQ8NDB6 213 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 RBM15BQ8NDT2 890 aaKnown RBP11.7□□□□□ -0.54
LINC00399-201ENST00000439008 TMEM45BQ96B21 275 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 APH1AQ96BI3 265 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 CMTM5Q96DZ9 223 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 PIK3IP1Q96FE7 263 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 TMEM43Q9BTV4 400 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 ZNF426Q9BUY5 554 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
LINC00399-201ENST00000439008 TAPBPLQ9BX59 468 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 MEPEQ9NQ76 525 aaPredicted RBP11.7□□□□□ -0.54
LINC00399-201ENST00000439008 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
LINC00399-201ENST00000439008 F8P00451 2351 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 TRAPPC13A5PLN9 417 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 CXCR6O00574 342 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 MRPL33O75394 65 aaKnown RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 ZNF432O94892 652 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 SELENOPP49908 381 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 SELENOWP63302 87 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 SLC25A3Q00325 362 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 FAPQ12884 760 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 P2RY6Q15077 328 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 TESK1Q15569 626 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 TMEM225Q6GV28 225 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 BHLHA15Q7RTS1 189 aaPredicted RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 LRRC17Q8N6Y2 441 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 ANKS4BQ8N8V4 417 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 PROX1Q92786 737 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
LINC00399-201ENST00000439008 TPD52L3Q96J77 140 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 AMBRA1Q9C0C7 1298 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 ALG2Q9H553 416 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 EVA1AQ9H8M9 152 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 MALT1Q9UDY8 824 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 EGFL7Q9UHF1 273 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 SLC9A8Q9Y2E8 581 aa11.69□□□□□ -0.54
LINC00399-201ENST00000439008 J3KTA2 159 aa11.68□□□□□ -0.54
LINC00399-201ENST00000439008 FFAR1O14842 300 aa11.68□□□□□ -0.54
LINC00399-201ENST00000439008 CASKO14936 926 aa11.68□□□□□ -0.54
LINC00399-201ENST00000439008 TRAF3IP2O43734 574 aaPredicted RBP11.68□□□□□ -0.54
LINC00399-201ENST00000439008 MSX2P35548 267 aaPredicted RBP11.68□□□□□ -0.54
LINC00399-201ENST00000439008 IST1P53990 364 aa11.68□□□□□ -0.54
LINC00399-201ENST00000439008 UGT2B15P54855 530 aa11.68□□□□□ -0.54
LINC00399-201ENST00000439008 FOXD4Q12950 439 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms