RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 TMEM71Q6P5X7 295 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 RPTNQ6XPR3 784 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 OR51L1Q8NGJ5 315 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 C16orf52Q8NHV5 167 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF501Q96CX3 271 aaPredicted RBP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SMAD5Q99717 465 aaKnown RBP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 ATF6BQ99941 703 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SOSTQ9BQB4 213 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 TMEM43Q9BTV4 400 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 GTPBP2Q9BX10 602 aaKnown RBP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SYNDIG1Q9H7V2 258 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 MCCC2Q9HCC0 563 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SERTAD3Q9UJW9 196 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC35A3Q9Y2D2 325 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC22A31A6NKX4 558 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 PTP4A3O75365 173 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 PRKAR1AP10644 381 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 CCL7P80098 99 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 MAB21L1Q13394 359 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 GALEQ14376 348 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 FCN2Q15485 313 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 LPAL2Q16609 132 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 TRIM61Q5EBN2 209 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 GATSQ8NAP1 163 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 SDR9C7Q8NEX9 313 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 OR4C3Q8NH37 302 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 HOXB13Q92826 284 aaPredicted RBP12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 PHF21AQ96BD5 680 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 MVB12AQ96EY5 273 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 LMF1Q96S06 567 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 CDCP1Q9H5V8 836 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 GMEB2Q9UKD1 530 aa12.7□□□□□ -0.38
PTCHD3-201ENST00000438700 J3QLW9 94 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 YKT6O15498 198 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 RGS9O75916 674 aaPredicted RBP12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 CT45A8P0DMV1 189 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 CT45A9P0DMV2 189 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 TFPIP10646 304 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF19P17023 458 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 EVX1P49640 407 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 HCCSP53701 268 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 E2F1Q01094 437 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 CT45A2Q5DJT8 189 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 C1orf189Q5VU69 101 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF767PQ75MW2 155 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR4K13Q8NH42 304 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR5W2Q8NH69 310 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 TTC9Q92623 222 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ERMAPQ96PL5 475 aaPredicted RBP12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ZNF426Q9BUY5 554 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ADGRL4Q9HBW9 690 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 Q9N2J8 555 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 TRIM36Q9NQ86 728 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ASCC3Q8N3C0 2202 aaKnown RBP12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 WDR87Q6ZQQ6 2873 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 A0A0A6YYJ9 748 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 MAGEB4O15481 346 aaPredicted RBP12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 HLA-DQB1P01920 261 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 SBK2P0C263 348 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR12D2P58182 307 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 PPP3R1P63098 170 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 FHL1Q13642 323 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 RTL4Q6ZR62 310 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 SSX6Q7RTT6 188 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 C17orf47Q8NEP4 570 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 OR52E2Q8NGJ4 325 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 PMM1Q92871 262 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 KCNJ15Q99712 375 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 TRIM2Q9C040 744 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ASB6Q9NWX5 421 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 RPS6KB2Q9UBS0 482 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ZMIZ1Q9ULJ6 1067 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 POLHQ9Y253 713 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
PTCHD3-201ENST00000438700 TRAV6A0A075B6T7 132 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 A8MUA0 341 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 CSTAP01040 98 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 PEPDP12955 493 aa12.68□□□□□ -0.38
PTCHD3-201ENST00000438700 FBLP22087 321 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms