RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ZCCHC3Q9NUD5 404 aaKnown RBP12.34□□□□□ -0.43
LINC01088-201ENST00000437737 CMTM6Q9NX76 183 aa12.34□□□□□ -0.43
LINC01088-201ENST00000437737 CD300AQ9UGN4 299 aa12.34□□□□□ -0.43
LINC01088-201ENST00000437737 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
LINC01088-201ENST00000437737 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 A0A1W2PQD3 144 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 DUXAA6NLW8 204 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 H0YHG0 523 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 NME4O00746 187 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SMAD9O15198 467 aaKnown RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 CYTIPO60759 359 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 AGR2O95994 175 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 ACP2P11117 423 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 ZNF23P17027 643 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 EGR1P18146 543 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 MTPNP58546 118 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 ACTG1P63261 375 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 RBBP4Q09028 425 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SELENBP1Q13228 472 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 RGNQ15493 299 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 FBXW9Q5XUX1 488 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 ZCCHC12Q6PEW1 402 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 C6orf120Q7Z4R8 191 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 NET1Q7Z628 596 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SLC30A8Q8IWU4 369 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 C3orf56Q8N813 242 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 NUP43Q8NFH3 380 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SOX7Q9BT81 388 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 BPESC1Q9GZL8 116 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 MYOZ1Q9NP98 299 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
LINC01088-201ENST00000437737 SIRT3Q9NTG7 399 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 TMEFF2Q9UIK5 374 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-201ENST00000437737 GSTA4O15217 222 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 LCN1P31025 176 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 MAP3K8P41279 467 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 CRATP43155 626 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 RNF144AP50876 292 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 P2RX1P51575 399 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 SNRPD2P62316 118 aaKnown RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 CEACAM7Q14002 265 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 TRIM25Q14258 630 aaKnown RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 GNA13Q14344 377 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 CYP51A1Q16850 503 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 GTDC1Q4AE62 458 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 CBLN3Q6UW01 205 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 COX18Q8N8Q8 333 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 SLC16A11Q8NCK7 471 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 ZNF540Q8NDQ6 660 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 OR2T12Q8NG77 320 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 OR10A6Q8NH74 314 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 MIPOL1Q8TD10 442 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 JADE3Q92613 823 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 HOXB13Q92826 284 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 ASB9Q96DX5 294 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 OTUB1Q96FW1 271 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 MS4A4EQ96PG1 132 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 OR5B2Q96R09 309 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 VRK1Q99986 396 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-201ENST00000437737 TRIM15Q9C019 465 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 CARD8Q9Y2G2 431 aa12.32□□□□□ -0.44
LINC01088-201ENST00000437737 MEGF8Q7Z7M0 2845 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ELOVL7A1L3X0 281 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 LRP5LA4QPB2 252 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 PRORSD1PA6NEY8 169 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 FAM220BPB1ANY3 271 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ANKRD65E5RJM6 399 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ATP6V1G2-DDX39BF2Z307 99 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 VENTXO95231 258 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ALOX5P09917 674 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 PRKCAP17252 672 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 MATN1P21941 496 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 GSK3BP49841 420 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 KHKP50053 298 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 SUMO3P55854 103 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-201ENST00000437737 TOMM34Q15785 309 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-201ENST00000437737 DUSP5Q16690 384 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 C1orf146Q5VVC0 180 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 SLC46A3Q7Z3Q1 461 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 CALHM3Q86XJ0 350 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 OR5AK3PQ8NH89 298 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
LINC01088-201ENST00000437737 SLC35G5Q96KT7 338 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 MRGPRX4Q96LA9 322 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 LRGUKQ96M69 825 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ZNF583Q96ND8 569 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 ASB6Q9NWX5 421 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
LINC01088-201ENST00000437737 TAS2R16Q9NYV7 291 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms