RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 SLC35F4A4IF30 521 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 A8MVM7 634 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 MPGP29372 298 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 FABP6P51161 128 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 P2RY4P51582 365 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 CRISP3P54108 245 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 BNIP2Q12982 314 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 RPS26P11Q5JNZ5 115 aaPredicted RBP13.16□□□□□ -0.3
DDR1-237ENST00000437124 ZNF544Q6NX49 715 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 IL17RELQ6ZVW7 336 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 AAED1Q7RTV5 226 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 CADM2Q8N3J6 435 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 RFLNBQ8N5W9 214 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 POMGNT2Q8NAT1 580 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 AURKBQ96GD4 344 aaPredicted RBP13.16□□□□□ -0.3
DDR1-237ENST00000437124 BOD1Q96IK1 185 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 ITCHQ96J02 903 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
DDR1-237ENST00000437124 ZNF443Q9Y2A4 671 aaPredicted RBP13.16□□□□□ -0.3
DDR1-237ENST00000437124 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
DDR1-237ENST00000437124 MALRD1Q5VYJ5 2156 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 A0A0G2JPF8 293 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 LOC100289279A0A1B0GTE1 492 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 HNRNPCL2B2RXH8 293 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 HNRNPCL3B7ZW38 293 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 UBDO15205 165 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 HNRNPCL1O60812 293 aaKnown RBP13.15□□□□□ -0.3
DDR1-237ENST00000437124 NPIPB7O75200 414 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 ANP32DO95626 131 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 HNRNPCL4P0DMR1 293 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 PRG2P13727 222 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 CFPP27918 469 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 POLR2JP52435 117 aaKnown RBP13.15□□□□□ -0.3
DDR1-237ENST00000437124 COPZ1P61923 177 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 LARS2Q15031 903 aaKnown RBP13.15□□□□□ -0.3
DDR1-237ENST00000437124 OR9I1Q8NGQ6 314 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 VPS33AQ96AX1 596 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 MSI2Q96DH6 328 aaKnown RBP13.15□□□□□ -0.3
DDR1-237ENST00000437124 TMEM19Q96HH6 336 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 SPATA9Q9BWV2 254 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 RMND5AQ9H871 391 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 CHODLQ9H9P2 273 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 FKRPQ9H9S5 495 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 THUMPD1Q9NXG2 353 aaKnown RBP13.15□□□□□ -0.3
DDR1-237ENST00000437124 ZNF232Q9UNY5 417 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 ATP23Q9Y6H3 246 aa13.15□□□□□ -0.3
DDR1-237ENST00000437124 VWC2LB2RUY7 222 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TMEM229AB2RXF0 380 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 FRS3O43559 492 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TCF21O43680 179 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 VAMP5O95183 116 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 EFNA4P52798 201 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 PRPS1P60891 318 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 MAGOHP61326 146 aaKnown RBP13.14□□□□□ -0.31
DDR1-237ENST00000437124 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 C1orf140Q5VVS0 124 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TMEM225Q6GV28 225 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 SERPINA11Q86U17 422 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 HTRA1Q92743 480 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 GTF2H4Q92759 462 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 C3orf49Q96BT1 292 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TLCD1Q96CP7 247 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TAPBPLQ9BX59 468 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 ADPRHL2Q9NX46 363 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 IFT52Q9Y366 437 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 TGP01266 2768 aa13.14□□□□□ -0.31
DDR1-237ENST00000437124 PKD1L1Q8TDX9 2849 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 A0A096LPI6 279 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 ATP6V1G2-DDX39BF2Z307 99 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 WNT11O96014 354 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 NUDT7P0C024 238 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 CDH2P19022 906 aaPredicted RBP13.13□□□□□ -0.31
DDR1-237ENST00000437124 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
DDR1-237ENST00000437124 APOBEC3AP31941 199 aaPredicted RBP13.13□□□□□ -0.31
DDR1-237ENST00000437124 RGNQ15493 299 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 C6orf10Q5SRN2 563 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 PRAMEF8Q5VWM4 474 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 PRAMEF7Q5VXH5 474 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 C12orf54Q6X4T0 127 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 CREB3L2Q70SY1 520 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 ABHD12BQ7Z5M8 362 aaPredicted RBP13.13□□□□□ -0.31
DDR1-237ENST00000437124 EPHX4Q8IUS5 362 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 MIER2Q8N344 545 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
DDR1-237ENST00000437124 ARMC7Q9H6L4 198 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 BCL2L10Q9HD36 194 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 OBP2BQ9NPH6 170 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 PCDHB14Q9Y5E9 798 aa13.13□□□□□ -0.31
DDR1-237ENST00000437124 TMEM247A6NEH6 219 aa13.12□□□□□ -0.31
DDR1-237ENST00000437124 NDUFS8O00217 210 aa13.12□□□□□ -0.31
DDR1-237ENST00000437124 KLF11O14901 512 aa13.12□□□□□ -0.31
DDR1-237ENST00000437124 LGI1O95970 557 aa13.12□□□□□ -0.31
DDR1-237ENST00000437124 BMP2P12643 396 aa13.12□□□□□ -0.31
DDR1-237ENST00000437124 BMP4P12644 408 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms