RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 IL7RP16871 459 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 ROR2Q01974 943 aaKnown RBP10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 EPS8Q12929 822 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 BNIP2Q12982 314 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 RIN1Q13671 783 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 GNA13Q14344 377 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 C3orf36Q3SXR2 165 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 FAM174BQ3ZCQ3 159 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 ANXA8L1Q5VT79 327 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 CREB3L2Q70SY1 520 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 GLCCI1Q86VQ1 547 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 MAGEE2Q8TD90 523 aaPredicted RBP10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 NEURL3Q96EH8 262 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 SLC35A5Q9BS91 424 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 SLC38A1Q9H2H9 487 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 MKS1Q9NXB0 559 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 ASIC5Q9NY37 505 aa10.04□□□□□ -0.8
CHRNA1-207ENST00000435083 B4DSR2 109 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 RGS9O75916 674 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 VAMP5O95183 116 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 CHRM4P08173 479 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 CBR1P16152 277 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 SERPINB5P36952 375 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 ARF1P84077 181 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 IL1RL1Q01638 556 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 NPRL3Q12980 569 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 GSTA3Q16772 222 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 MRPL2Q5T653 305 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 PRAMEF8Q5VWM4 474 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 PRAMEF7Q5VXH5 474 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 MYPOPQ86VE0 399 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 CDK20Q8IZL9 346 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 CADM2Q8N3J6 435 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 FAM169BQ8N8A8 192 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 SEMA6DQ8NFY4 1073 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 ZFAND2BQ8WV99 257 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 ZNF317Q96PQ6 595 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 TRNT1Q96Q11 434 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 NELFAQ9H3P2 528 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 TPK1Q9H3S4 243 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 NARFLQ9H6Q4 476 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 MTHFD2LQ9H903 347 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 MOV10Q9HCE1 1003 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 ANK2Q01484 3957 aa10.03□□□□□ -0.8
CHRNA1-207ENST00000435083 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 A8MVM7 634 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 IGKV3-15P01624 115 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 DBIP07108 87 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 GKN3PP0CG01 181 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 EGR1P18146 543 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 P2RY4P51582 365 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 SH3BGRP55822 239 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 CASP8Q14790 479 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 PDCD2Q16342 344 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 SMU1Q2TAY7 513 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 SHQ1Q6PI26 577 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 LRRC74BQ6ZQY2 392 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 RNF130Q86XS8 419 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 EPHX4Q8IUS5 362 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 ZNF440Q8IYI8 595 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 TCP10LQ8TDR4 215 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 GCDHQ92947 438 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 LINC00470Q9BZP3 86 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 AKTIPQ9H8T0 292 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 LPAR2Q9HBW0 351 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 CRLF2Q9HC73 371 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 RLIMQ9NVW2 624 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 RASD1Q9Y272 281 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 SVEP1Q4LDE5 3571 aa10.02□□□□□ -0.81
CHRNA1-207ENST00000435083 TMEM229AB2RXF0 380 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 FRS3O43559 492 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 NR2F1P10589 423 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 S100A3P33764 101 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 ANXA11P50995 505 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 CLDN17P56750 224 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 COPZ1P61923 177 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 DAG1Q14118 895 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 SPANXN4Q5MJ08 99 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 C1orf140Q5VVS0 124 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 KRT80Q6KB66 452 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 THSD4Q6ZMP0 1018 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 DEF8Q6ZN54 512 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 PEX5LQ8IYB4 626 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 KDM8Q8N371 416 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 SGMS2Q8NHU3 365 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 SLC25A36Q96CQ1 311 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 ZMYND19Q96E35 227 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 CMAHPQ9Y471 501 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 CCDC154A6NI56 674 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 TFPTP0C1Z6 253 aa10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 NCF2P19878 526 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 TCN1P20061 433 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-207ENST00000435083 RPS4Y1P22090 263 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms