RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ACAD8Q9UKU7 415 aa6.89□□□□□ -1.31
CPSF6-202ENST00000435070 PLXNA4Q9HCM2 1894 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 TRBV2A0A0J9YWF9 115 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 OR5H14A6NHG9 310 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 WASH3PC4AMC7 463 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 GPR37O15354 613 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 TSPAN6O43657 245 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CLN5O75503 358 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PRF1P14222 555 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 NDUFV2P19404 249 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CPT2P23786 658 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PNLIPRP2P54317 469 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF750Q32MQ0 723 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ARSJQ5FYB0 599 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 LYPLAL1Q5VWZ2 237 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CDPF1Q6NVV7 123 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF563Q8TA94 476 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZMYND19Q96E35 227 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 SSX3Q99909 188 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 A4GALTQ9NPC4 353 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 NAP1L6A6NFF2 107 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 IDSB3KWA1 339 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PPM1DO15297 605 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RPLP2P05387 115 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF44P15621 663 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 SERPINA4P29622 427 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 GRPRP30550 384 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ODF4Q2M2E3 257 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 OR52W1Q6IF63 320 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CD300LDQ6UXZ3 194 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MEPCEQ7L2J0 689 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 FAM219AQ8IW50 185 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MCEMP1Q8IX19 187 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 UFSP2Q9NUQ7 469 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF337Q9Y3M9 751 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 HELZP42694 1942 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 FKTNO75072 461 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RBBP9O75884 186 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 F2P00734 622 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 NME1P15531 152 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 EDNRAP25101 427 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 HSD17B2P37059 387 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CASP6P55212 293 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PLA2G7Q13093 441 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ELAVL1Q15717 326 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 UBE2NLQ5JXB2 153 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 FAM199XQ6PEV8 388 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 C7orf61Q8IZ16 206 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 OR52L1Q8NGH7 329 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 DOK4Q8TEW6 326 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PGLYRP3Q96LB9 341 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 CPEB1Q9BZB8 566 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PLAGL1Q9UM63 463 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 A0A087WV48 116 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 A6NLC8 198 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RFPL4AA6NLU0 287 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RFPL4AL1F8VTS6 287 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 M0QZQ0 153 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 PLPP2O43688 288 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 GSTZ1O43708 216 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ARL6IP5O75915 188 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 IL5P05113 134 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZDHHC11BP0C7U3 371 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ST6GAL1P15907 406 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RPA2P15927 270 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 BMP7P18075 431 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ITPKBP27987 946 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ACSM1Q08AH1 577 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 NIPAL3Q6P499 406 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 SPOCK3Q9BQ16 436 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 NOP16Q9Y3C1 178 aaKnown RBP6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ATG4BQ9Y4P1 393 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ANKRD20A5PA0PJZ0 165 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 FBXO45P0C2W1 286 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 S100GP29377 79 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 OMPP47874 163 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 KCNAB1Q14722 419 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ETFBKMTQ8IXQ9 262 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 STEAP2Q8NFT2 490 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF480Q8WV37 535 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 RAD51AP1Q96B01 352 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MCHR1Q99705 422 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF559Q9BR84 538 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 OR52D1Q9H346 318 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 MYNNQ9NPC7 610 aa6.88□□□□□ -1.31
CPSF6-202ENST00000435070 BRCA2P51587 3418 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 NEDD8-MDP1E9PL57 170 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 IGLV3-27P01718 113 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 ASGR2P07307 311 aa6.87□□□□□ -1.31
CPSF6-202ENST00000435070 PRKAR2AP13861 404 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms