RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 NUP37Q8NFH4 326 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 BCL2L2Q92843 193 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-203ENST00000432581 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
PRKDC-203ENST00000432581 ADPRHL2Q9NX46 363 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 RASD1Q9Y272 281 aa12.94□□□□□ -0.34
PRKDC-203ENST00000432581 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 CDHR4A6H8M9 788 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 FRS3O43559 492 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 STAMBPO95630 424 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 KRT75O95678 551 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 IGLV1-44P01699 117 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 C1QCP02747 245 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 CECR9P0C854 216 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 GIFP27352 417 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 SRSF2Q01130 221 aaKnown RBP12.93□□□□□ -0.34
PRKDC-203ENST00000432581 C1orf140Q5VVS0 124 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 PRAMEF8Q5VWM4 474 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 PRAMEF7Q5VXH5 474 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 OGFOD2Q6N063 350 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 NIPAL3Q6P499 406 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 VHLLQ6RSH7 139 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF621Q6ZSS3 439 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 RFLNBQ8N5W9 214 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 NEU4Q8WWR8 484 aaPredicted RBP12.93□□□□□ -0.34
PRKDC-203ENST00000432581 HPS1Q92902 700 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 NUF2Q9BZD4 464 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF442Q9H7R0 627 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 MEAF6Q9HAF1 191 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 RLIMQ9NVW2 624 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 CALML5Q9NZT1 146 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 P2RX2Q9UBL9 471 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 HAO1Q9UJM8 370 aa12.93□□□□□ -0.34
PRKDC-203ENST00000432581 A0A096LPE4 126 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 A0A1W2PPZ6 126 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 IGKV3-15P01624 115 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 TFPTP0C1Z6 253 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 GKN3PP0CG01 181 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 DAOP14920 347 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 CALCRP30988 508 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 ACAA2P42765 397 aaKnown RBP12.92□□□□□ -0.34
PRKDC-203ENST00000432581 SLC1A6P48664 564 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 CHN2P52757 468 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 NME5P56597 212 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 BNIP2Q12982 314 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 COX20Q5RI15 118 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 RNF220Q5VTB9 566 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 ZNF836Q6ZNA1 936 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
PRKDC-203ENST00000432581 EPHX4Q8IUS5 362 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 OR52P1PQ8NH57 321 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 PNPT1Q8TCS8 783 aaKnown RBP12.92□□□□□ -0.34
PRKDC-203ENST00000432581 STK35Q8TDR2 534 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 TEX37Q96LM6 180 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 ANKRD27Q96NW4 1050 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 OR52E6Q96RD3 313 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 SORT1Q99523 831 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 C20orf27Q9GZN8 174 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 ARMC7Q9H6L4 198 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 RCE1Q9Y256 329 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 PCDHB14Q9Y5E9 798 aa12.92□□□□□ -0.34
PRKDC-203ENST00000432581 DSPPQ9NZW4 1301 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 RPL36A-HNRNPH2H7BZ11 118 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 NR5A2O00482 541 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TCF21O43680 179 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 NPIPB7O75200 414 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 UPK3AO75631 287 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TACSTD2P09758 323 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 NCF2P19878 526 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 NPR2P20594 1047 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 CDKN2CP42773 168 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 CRISP3P54108 245 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 UFM1P61960 85 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TUBA1BP68363 451 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TUBA4AP68366 448 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 ROR2Q01974 943 aaKnown RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 LARS2Q15031 903 aaKnown RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 UGT2A3Q6UWM9 527 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TUBA1AQ71U36 451 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 VRK2Q86Y07 508 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 LINC01356Q8N9X3 169 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 MFSD8Q8NHS3 518 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 SOX7Q9BT81 388 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 NELFAQ9H3P2 528 aa12.91□□□□□ -0.34
PRKDC-203ENST00000432581 CACYBPQ9HB71 228 aaKnown RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 SSU72Q9NP77 194 aaKnown RBP12.91□□□□□ -0.34
PRKDC-203ENST00000432581 LRP5LA4QPB2 252 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 TMEM229AB2RXF0 380 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 RFXANKO14593 260 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 TM9SF1O15321 606 aa12.9□□□□□ -0.34
PRKDC-203ENST00000432581 AHSA1O95433 338 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms