RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TOMM34Q15785 309 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 LSM12Q3MHD2 195 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 AWAT1Q58HT5 328 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 PDZK1Q5T2W1 519 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 ATAD3BQ5T9A4 648 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 USP43Q70EL4 1123 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 LCA5Q86VQ0 697 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 CCDC63Q8NA47 563 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 CLHC1Q8NHS4 586 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 MGARPQ8TDB4 240 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 MOAP1Q96BY2 351 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 DNAJA3Q96EY1 480 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 C16orf58Q96GQ5 468 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 METTL2AQ96IZ6 378 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 ZIM3Q96PE6 472 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 TSSK3Q96PN8 268 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 PRPF18Q99633 342 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 CCT7Q99832 543 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 TMBIM4Q9HC24 238 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 SLC52A3Q9NQ40 469 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 OXSMQ9NWU1 459 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 C1orf109Q9NX04 203 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 GRHL1Q9NZI5 618 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 SF3B6Q9Y3B4 125 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 FIS1Q9Y3D6 152 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 PCDHGB1Q9Y5G3 927 aa6.82□□□□□ -1.32
ECHDC1-207ENST00000430841 ARFGEF3Q5TH69 2177 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 A0A0G2JMP0 313 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 A0A0X1KG70 313 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 EXOC1LA0A1B0GW35 172 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SERINC4A6NH21 518 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 OR6C65A6NJZ3 312 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 DUXAA6NLW8 204 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 M0R233 179 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 PPIHO43447 177 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 PEX14O75381 377 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 STX11O75558 287 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 FAM107AO95990 144 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SCG5P05408 212 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 EFNA1P20827 205 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 EDNRAP25101 427 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 GTF2E2P29084 291 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 IL2RGP31785 369 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 RYKP34925 604 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 MDH1P40925 334 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 HTR3AP46098 478 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 CLK1P49759 484 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SH3BGRP55822 239 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 NPRL3Q12980 569 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 EFNB3Q15768 340 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ADIPOQQ15848 244 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 GALNTL6Q49A17 601 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 HIKESHIQ53FT3 197 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 KLHL26Q53HC5 615 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 UNC50Q53HI1 259 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SLC25A53Q5H9E4 307 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 OTUD3Q5T2D3 398 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 AAED1Q7RTV5 226 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 GPAT4Q86UL3 456 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZBTB46Q86UZ6 589 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 DDIASQ8IXT1 998 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF786Q8N393 782 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 LRRC17Q8N6Y2 441 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 POU5F2Q8N7G0 328 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 OR4M2Q8NGB6 313 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 CKAP2Q8WWK9 683 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF75CPQ92670 426 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 PMM1Q92871 262 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 RAB39BQ96DA2 213 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 MTERF3Q96E29 417 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 FAM120BQ96EK7 910 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF764Q96H86 408 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF317Q96PQ6 595 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SOX7Q9BT81 388 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 TMEM109Q9BVC6 243 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 TAPBPLQ9BX59 468 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ROPN1BQ9BZX4 212 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 LAT2Q9GZY6 243 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 TPK1Q9H3S4 243 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF696Q9H7X3 374 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ROPN1Q9HAT0 212 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 CACYBPQ9HB71 228 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SLC7A10Q9NS82 523 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ACER3Q9NUN7 267 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 EXD2Q9NVH0 621 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 TMEM181Q9P2C4 612 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF225Q9UK10 706 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 ING1Q9UK53 422 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 PCDHGB4Q9UN71 923 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 SLC35A3Q9Y2D2 325 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 CMAHPQ9Y471 501 aa6.81□□□□□ -1.32
ECHDC1-207ENST00000430841 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.8□□□□□ -1.32
ECHDC1-207ENST00000430841 IGHV1-18A0A0C4DH31 117 aa6.8□□□□□ -1.32
ECHDC1-207ENST00000430841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-207ENST00000430841 HMX2A2RU54 273 aa6.8□□□□□ -1.32
ECHDC1-207ENST00000430841 ZNF716A6NP11 495 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms