RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 Q6ZPB1 254 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-206ENST00000429895 FAM43BQ6ZT52 329 aaPredicted RBP14.3□□□□□ -0.12
PTPRF-206ENST00000429895 OR1J2Q8NGS2 313 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ST7LQ8TDW4 575 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TNFRSF13CQ96RJ3 184 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMED7Q9Y3B3 224 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 PLEKHM1Q9Y4G2 1056 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 GABRPO00591 440 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ARL16Q0P5N6 197 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMEM189-UBE2V1I3L0A0 370 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ACP2P11117 423 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TGM4P49221 684 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 YPEL5P62699 121 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF750Q32MQ0 723 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 S100A7AQ86SG5 101 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 PIGQQ9BRB3 760 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 ANKRD19PQ9H560 264 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 MYOTQ9UBF9 498 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
PTPRF-206ENST00000429895 TMEM265A0A087WTH1 108 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 IGHV3-20A0A0C4DH32 117 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 SERINC4A6NH21 518 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 NKX6-3A6NJ46 265 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 MED6O75586 246 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 SLC14A2Q15849 920 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 PAPD4Q6PIY7 484 aaKnown RBP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 OR51D1Q8NGF3 324 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 P2RY10O00398 339 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 RFPL3O75679 317 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 DEFA4P12838 97 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 TAS2R46P59540 309 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 MRPS34P82930 218 aaKnown RBP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 MARCH3Q86UD3 253 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 RCE1Q9Y256 329 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 FAM166BA8MTA8 275 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF587BE7ETH6 402 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 GASTP01350 101 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 INHBCP55103 352 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 CBLL1Q75N03 491 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 ADGRG5Q8IZF4 528 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 SPHK1Q9NYA1 384 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 IMPA2O14732 288 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 MSTNO14793 375 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 C21orf33P30042 268 aaPredicted RBP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 TMEM178AQ8NBL3 297 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 GGHQ92820 318 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 C1QTNF6Q9BXI9 259 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 GFRA2O00451 464 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 PRAF2O60831 178 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 ANXA7P20073 488 aaKnown RBP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 TAS2R30P59541 319 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 GPR19Q15760 415 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 SPARTQ8N0X7 666 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 METTL4Q8N3J2 472 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 KHSRPQ92945 711 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 ANKRD9Q96BM1 317 aaPredicted RBP14.29□□□□□ -0.12
PTPRF-206ENST00000429895 FGF21Q9NSA1 209 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 SLAMF8Q9P0V8 285 aa14.29□□□□□ -0.12
PTPRF-206ENST00000429895 HSD17B6O14756 317 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 HCRTR1O43613 425 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 PRKACBP22694 351 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 EPHA5P54756 1037 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 SORDQ00796 357 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 GPR176Q14439 515 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 SYT13Q7L8C5 426 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 OVCH1Q7RTY7 1134 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 TCTEX1D2Q8WW35 142 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 KIF25Q9UIL4 384 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MRPS28Q9Y2Q9 187 aaKnown RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 OPRD1P41143 372 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MC2RQ01718 297 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MFAP5Q13361 173 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZFP90Q8TF47 636 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 TNFRSF10AO00220 468 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 EFSO43281 561 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF749O43361 778 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 C2orf76Q3KRA6 126 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF813Q6ZN06 617 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZFP82Q8N141 532 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ARRDC2Q8TBH0 407 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 THOC3Q96J01 351 aaKnown RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZNF814B7Z6K7 855 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MGST1P10620 155 aaKnown RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 SNRPBP14678 240 aaKnown RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MAKP20794 623 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 MRPS10P82664 201 aaKnown RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 PEA15Q15121 130 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ZFAND2BQ8WV99 257 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 UBL7Q96S82 380 aaPredicted RBP14.28□□□□□ -0.12
PTPRF-206ENST00000429895 NMNAT3Q96T66 252 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 ALG12Q9BV10 488 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 GORASP2Q9H8Y8 452 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 NOX4Q9NPH5 578 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 INPP5EQ9NRR6 644 aa14.28□□□□□ -0.12
PTPRF-206ENST00000429895 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms