RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 SPICQ8N5J4 248 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 ZNF454Q8N9F8 522 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 OR56B4Q8NH76 319 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 OR1S1Q8NH92 325 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 NUDT8Q8WV74 236 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 COL26A1Q96A83 441 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 MRPL48Q96GC5 212 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 TAAR9Q96RI9 348 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 SERINC2Q96SA4 455 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 THAP7Q9BT49 309 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 SLC25A32Q9H2D1 315 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 POLE3Q9NRF9 147 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TEX10Q9NXF1 929 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 CLEC2DQ9UHP7 191 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 FBXL2Q9UKC9 423 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 PPIEQ9UNP9 301 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 TMEM184BQ9Y519 407 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 AKAP13Q12802 2813 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 A0A0G2JPF8 293 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 HMSDA8MTL9 139 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 HNRNPCL3B7ZW38 293 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 L7N2F9 121 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 RFXANKO14593 260 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 ENTPD6O75354 484 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 NSA2O95478 260 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 HPP00738 406 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 IL3P08700 152 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 GIPP09681 153 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 HNRNPCL4P0DMR1 293 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 PPIBP23284 216 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 GCGRP47871 477 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TSPAN5P62079 268 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 SHC2P98077 582 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 RUNX2Q13950 521 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 FAM53BQ14153 422 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 ARHGAP40Q5TG30 622 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 RHBDD2Q6NTF9 364 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 UQCC3Q6UW78 93 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TMPRSS7Q7RTY8 843 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TSEN54Q7Z6J9 526 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 KRTCAP2Q8N6L1 136 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 OR5M9Q8NGP3 310 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 OR5M3Q8NGP4 307 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 C16orf78Q8WTQ4 265 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 PEX11GQ96HA9 241 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 NIPSNAP1Q9BPW8 284 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 MRPS18AQ9NVS2 196 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 FOXJ2Q9P0K8 574 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 MYEF2Q9P2K5 600 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 SEC14L3Q9UDX4 400 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 CORO2BQ9UQ03 480 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 GLOD5A6NK44 160 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 C9orf172C9J069 976 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 MCRIP1C9JLW8 97 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 LGALS8O00214 317 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 CLIC1O00299 241 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 RP2O75695 350 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 CDC123O75794 336 aaPredicted RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 IGHV2-70P01814 119 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 ACAA1P09110 424 aaPredicted RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 PPP3CBP16298 524 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 SPINK2P20155 84 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 FBLP22087 321 aaKnown RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 PCGF2P35227 344 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 TSFMP43897 325 aaKnown RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 LIM2P55344 173 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 RAP2BP61225 183 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 RPS7P62081 194 aaKnown RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 SKP1P63208 163 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 MC1RQ01726 317 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 FAM76BQ5HYJ3 339 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 TMEM164Q5U3C3 297 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 YOD1Q5VVQ6 348 aaPredicted RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 C18orf63Q68DL7 685 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 TMEM91Q6ZNR0 172 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 BEND4Q6ZU67 534 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 IKBIPQ70UQ0 350 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 SKA3Q8IX90 412 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 CA13Q8N1Q1 262 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 FAM71CQ8NEG0 241 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 SENP5Q96HI0 755 aaPredicted RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 C5AR2Q9P296 337 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 GPR160Q9UJ42 338 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 ADAM29Q9UKF5 820 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 SPATA2Q9UM82 520 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 DAPP1Q9UN19 280 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 ATG4BQ9Y4P1 393 aa10.47□□□□□ -0.73
CECR3-201ENST00000428828 NUP214P35658 2090 aaPredicted RBP10.47□□□□□ -0.73
CECR3-201ENST00000428828 TMEM229AB2RXF0 380 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 CASKO14936 926 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 CHST10O43529 356 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 PRMT3O60678 531 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 STK17BO94768 372 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 RAB36O95755 333 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 HRGP04196 525 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 GLAP06280 429 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 PRF1P14222 555 aa10.46□□□□□ -0.73
CECR3-201ENST00000428828 CPN1P15169 458 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms