RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 IL18BPO95998 194 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 THRBP10828 461 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 RHCEP18577 417 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 FUT4P22083 530 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 AHCYP23526 432 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 GRNP28799 593 aaKnown RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 AGTR1P30556 359 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 SNTB1Q13884 538 aaKnown RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 MTX3Q5HYI7 312 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 LINC00114Q6XXX2 140 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 H1FNTQ75WM6 255 aaPredicted RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 STK32CQ86UX6 486 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 ZNF100Q8IYN0 542 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 UBE2J2Q8N2K1 259 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 LRRC17Q8N6Y2 441 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 RELL2Q8NC24 303 aaPredicted RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 HS6ST2Q96MM7 605 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 PSMG3-AS1Q96PY0 264 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 PIP5K1AQ99755 562 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 RBM24Q9BX46 236 aaKnown RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 PIGMQ9H3S5 423 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 NANSQ9NR45 359 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 PLEKHB1Q9UF11 243 aaPredicted RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 POMPQ9Y244 141 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 NOSIPQ9Y314 301 aaKnown RBP12.96□□□□□ -0.33
SGCE-204ENST00000428696 PHF3Q92576 2039 aaKnown RBP12.96□□□□□ -0.34
SGCE-204ENST00000428696 ENO4A6NNW6 628 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 GPR171O14626 319 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 CIB2O75838 187 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 IGHV3-9P01782 118 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 IFI30P13284 250 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 RBM34P42696 430 aaKnown RBP12.96□□□□□ -0.34
SGCE-204ENST00000428696 UGT2B15P54855 530 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 H3F3AP84243 136 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 LTBQ06643 244 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 MFSD13AQ14CX5 517 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 SP5Q6BEB4 398 aaPredicted RBP12.96□□□□□ -0.34
SGCE-204ENST00000428696 TBPL2Q6SJ96 375 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 TSEN54Q7Z6J9 526 aaKnown RBP12.96□□□□□ -0.34
SGCE-204ENST00000428696 GALNT5Q7Z7M9 940 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 CDK20Q8IZL9 346 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 OFCC1Q8IZS5 231 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 OR6K3Q8NGY3 331 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 SGTBQ96EQ0 304 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 RSRC1Q96IZ7 334 aaKnown RBP12.96□□□□□ -0.34
SGCE-204ENST00000428696 PSD2Q9BQI7 771 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 LRMDAQ9H2I8 198 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 CHST11Q9NPF2 352 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 SLC7A8Q9UHI5 535 aa12.96□□□□□ -0.34
SGCE-204ENST00000428696 TCRBV5S2A0A599 114 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 AQP7P3A6NL99 342 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 FTCDNL1E5RQL4 147 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 C11orf98E9PRG8 122 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 BLOC1S5-TXNDC5H3BN57 136 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 MRPL33O75394 65 aaKnown RBP12.95□□□□□ -0.34
SGCE-204ENST00000428696 GADD45GO95257 159 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 BGLAPP02818 100 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 ZNF43P17038 809 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 FUT1P19526 365 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 ASCL1P50553 236 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 SMIM11AP58511 58 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGCE-204ENST00000428696 C1orf146Q5VVC0 180 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 HIST2H2BCQ6DN03 193 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 PODNL1Q6PEZ8 512 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 CASP12Q6UXS9 341 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 NRMQ8IXM6 262 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 OR9K2Q8NGE7 335 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 ZNF347Q96SE7 839 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
SGCE-204ENST00000428696 SLC19A3Q9BZV2 496 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 IL1RAPQ9NPH3 570 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
SGCE-204ENST00000428696 TMCC3Q9ULS5 477 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 RASD1Q9Y272 281 aa12.95□□□□□ -0.34
SGCE-204ENST00000428696 DHRS12A0PJE2 317 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ZNF716A6NP11 495 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 A8MXE2 369 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 C19orf84I3L1E1 186 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 GNGT2O14610 69 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 MSTNO14793 375 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 KRT33AO76009 404 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 MT-ATP6P00846 226 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 SAGP10523 405 aaPredicted RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 RRM2P31350 389 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 SLC17A1Q14916 467 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ZNF74Q16587 644 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ABLIM2Q6H8Q1 611 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ALKBH2Q6NS38 261 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 AAED1Q7RTV5 226 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 PIK3C3Q8NEB9 887 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 RNASE6Q93091 150 aaKnown RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
SGCE-204ENST00000428696 MMADHCQ9H3L0 296 aaPredicted RBP12.94□□□□□ -0.34
SGCE-204ENST00000428696 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms