RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 MVDP53602 400 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 TUBA1BP68363 451 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 TUBA4AP68366 448 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 SLC25A3Q00325 362 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 CHRNB3Q05901 458 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 RGNQ15493 299 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 HMBOX1Q6NT76 420 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 TUBA1AQ71U36 451 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 C17orf78Q8N4C9 275 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 ZNF525Q8N782 197 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 ZIC4Q8N9L1 334 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
TTC3-208ENST00000428693 TMEM45BQ96B21 275 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 MAELQ96JY0 434 aaKnown RBP10.53□□□□□ -0.72
TTC3-208ENST00000428693 ALKBH3Q96Q83 286 aaPredicted RBP10.53□□□□□ -0.72
TTC3-208ENST00000428693 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
TTC3-208ENST00000428693 SPATA9Q9BWV2 254 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 TMBIM4Q9HC24 238 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 ADAM21Q9UKJ8 722 aa10.53□□□□□ -0.72
TTC3-208ENST00000428693 PDLIM1O00151 329 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 CD5LO43866 347 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 LY6HO94772 140 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 CLDN17P56750 224 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 NCALDP61601 193 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 KRTAP1-1Q07627 177 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 C1DQ13901 141 aaKnown RBP10.52□□□□□ -0.73
TTC3-208ENST00000428693 ZSWIM7Q19AV6 140 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 GCNT6Q5T4J0 391 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 ZNF544Q6NX49 715 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 MSANTD1Q6ZTZ1 278 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 CREB3L2Q70SY1 520 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 NFKBIDQ8NI38 313 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 BBS10Q8TAM1 723 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 LRRC8CQ8TDW0 803 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 DYDC1Q8WWB3 177 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 FAM168AQ92567 244 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 GTF2H4Q92759 462 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 VRK1Q99986 396 aaPredicted RBP10.52□□□□□ -0.73
TTC3-208ENST00000428693 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 PAIP1Q9H074 479 aaKnown RBP10.52□□□□□ -0.73
TTC3-208ENST00000428693 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 SELENONQ9NZV5 590 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 SLC13A4Q9UKG4 626 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 RASD1Q9Y272 281 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 DSPPQ9NZW4 1301 aa10.52□□□□□ -0.73
TTC3-208ENST00000428693 A0A096LPI6 279 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 TLX2O43763 284 aaPredicted RBP10.51□□□□□ -0.73
TTC3-208ENST00000428693 UPK3AO75631 287 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 VAMP5O95183 116 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 PNMTP11086 282 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 ZNF43P17038 809 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
TTC3-208ENST00000428693 CAPZA2P47755 286 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 SLC18A1P54219 525 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 DSCR9P59020 149 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 TBRG1Q3YBR2 411 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 C11orf71Q6IPW1 123 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 EPGNQ6UW88 154 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 SLC46A3Q7Z3Q1 461 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 KRT73Q86Y46 540 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 STK35Q8TDR2 534 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 TLCD1Q96CP7 247 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 KTI12Q96EK9 354 aaPredicted RBP10.51□□□□□ -0.73
TTC3-208ENST00000428693 A4GALTQ9NPC4 353 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.51□□□□□ -0.73
TTC3-208ENST00000428693 ATRQ13535 2644 aa10.51□□□□□ -0.73
TTC3-208ENST00000428693 IGHV1-18A0A0C4DH31 117 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 A8MV72 311 aaPredicted RBP10.5□□□□□ -0.73
TTC3-208ENST00000428693 SLC43A1O75387 559 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 IFNA2P01563 188 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 CRYAAP02489 173 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 NQO1P15559 274 aaKnown RBP10.5□□□□□ -0.73
TTC3-208ENST00000428693 AQP1P29972 269 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 IDH3AP50213 366 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 AQP5P55064 265 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 SNRPD2P62316 118 aaKnown RBP10.5□□□□□ -0.73
TTC3-208ENST00000428693 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
TTC3-208ENST00000428693 FADDQ13158 208 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 CHRFAM7AQ494W8 412 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 AGKQ53H12 422 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 CARD17Q5XLA6 110 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 EPHX4Q8IUS5 362 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 GPR137CQ8N3F9 429 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 C10orf53Q8N6V4 93 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 OR1K1Q8NGR3 316 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 MFSD8Q8NHS3 518 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 SPDL1Q96EA4 605 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 SLC38A2Q96QD8 506 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 EBF4Q9BQW3 602 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 PRR14Q9BWN1 585 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 AMBRA1Q9C0C7 1298 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 SEC14L4Q9UDX3 406 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 CHST2Q9Y4C5 530 aa10.5□□□□□ -0.73
TTC3-208ENST00000428693 FKBP7Q9Y680 259 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms