RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 OR7D2Q96RA2 312 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 PIP5K1AQ99755 562 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 MS4A8Q9BY19 250 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 SEMA4CQ9C0C4 833 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 SMOXQ9NWM0 555 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 PCDHGA3Q9Y5H0 932 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 CACNA1CQ13936 2221 aa6.66□□□□□ -1.34
CNOT4-206ENST00000428680 PIGBOS1A0A0B4J2F0 54 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 IGHV5-51A0A0C4DH38 117 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 HLA-DPB1P04440 258 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 F8A1P23610 371 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 LIM2P55344 173 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 GPX6P59796 221 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF92Q03936 586 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 RGS7BPQ6MZT1 257 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SLCO4C1Q6ZQN7 724 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 FCRLAQ7L513 359 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TRIM46Q7Z4K8 759 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 RETREG3Q86VR2 466 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 MARCH9Q86YJ5 346 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ELMOD2Q8IZ81 293 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 METTL4Q8N3J2 472 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SAP25Q8TEE9 199 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TSPEARQ8WU66 669 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TTC9Q92623 222 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SLC7A6OSQ96CW6 309 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 C16orf58Q96GQ5 468 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 PRORYQ9H606 182 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 METTL8Q9H825 291 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SLC23A2Q9UGH3 650 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 NME7Q9Y5B8 376 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SPENQ96T58 3664 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TNRC6BQ9UPQ9 1833 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TSPAN11A1L157 253 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 AQP12BA6NM10 295 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 J3QKU1 62 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 CASC3O15234 703 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SNAPC5O75971 98 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 B3GALT4O96024 378 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 STSP08842 583 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 RHCEP18577 417 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 GGT1P19440 569 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 NFYBP25208 207 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 APOBEC1P41238 236 aaKnown RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 PPICP45877 212 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TGM4P49221 684 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 F2RL1P55085 397 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 BTG2P78543 158 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 MICAQ29983 383 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 IGDCC3Q8IVU1 814 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 AQP12AQ8IXF9 295 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 OR1L3Q8NH93 324 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 OR2V1Q8NHB1 315 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 PHB2Q99623 299 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TMEM43Q9BTV4 400 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 UCK1Q9HA47 277 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 MYO16Q9Y6X6 1858 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 C5orf51A6NDU8 294 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ITM2AO43736 263 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 PPP1R3DO95685 299 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 DHFRP00374 187 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 HPP00738 406 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 FAM87AP0C7U9 286 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 FRKP42685 505 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 EDDM3AQ14507 147 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 KRTCAP3Q53RY4 240 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 LETMD1Q6P1Q0 360 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 BEST3Q8N1M1 668 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 FBXO27Q8NI29 283 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SLC25A44Q96H78 314 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 SLC41A2Q96JW4 573 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 LYSMD1Q96S90 227 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 DDA1Q9BW61 102 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 CCM2LQ9NUG4 571 aaPredicted RBP6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ABCD2Q9UBJ2 740 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 BTNL2Q9UIR0 455 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 ATG4BQ9Y4P1 393 aa6.65□□□□□ -1.34
CNOT4-206ENST00000428680 TRAV36DV7A0A075B6V5 113 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 LOC100509620A0A075B734 347 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 ZCWPW2A0A1B0GU75 182 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 ENO4A6NNW6 628 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 M0R3H8 397 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 CDKN2CP42773 168 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 ZNF81P51508 661 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 CLDN6P56747 220 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 SEC61A1P61619 476 aaKnown RBP6.65□□□□□ -1.35
CNOT4-206ENST00000428680 RNF4P78317 190 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 PDK3Q15120 406 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 OR8G1Q15617 311 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 PROX2Q3B8N5 592 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 GLYR1Q49A26 553 aaPredicted RBP6.65□□□□□ -1.35
CNOT4-206ENST00000428680 MEDAGQ5VYS4 303 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 NANOGP8Q6NSW7 305 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 MRGPREQ86SM8 312 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 FAM185AQ8N0U4 392 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 CYB561A3Q8NBI2 242 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 OR13J1Q8NGT2 312 aa6.65□□□□□ -1.35
CNOT4-206ENST00000428680 AKAP1Q92667 903 aaKnown RBP eCLIP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms