RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 H7C417 338 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 PNMTP11086 282 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 HOXB1P14653 301 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 PRKAR1BP31321 381 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 APOBEC3AP31941 199 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 MFSD13AQ14CX5 517 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 ELOA3BQ3SY89 546 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 BEND6Q5SZJ8 279 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 GCNT6Q5T4J0 391 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 C9orf135Q5VTT2 229 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 C11orf71Q6IPW1 123 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 DNM1P46Q6ZS02 220 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 MAVSQ7Z434 540 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 CLIP4Q8N3C7 705 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 ELOA3Q8NG57 546 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 DNAJA4Q8WW22 397 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 PAIP1Q9H074 479 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC13A4Q9UKG4 626 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 RCE1Q9Y256 329 aa13.56□□□□□ -0.24
CTDSP1-202ENST00000428361 A0A1W2PR80 420 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 EVPLLA8MZ36 301 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 TMEM229AB2RXF0 380 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 CD5LO43866 347 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 SSX4O60224 188 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 NPIPB7O75200 414 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 CRLF1O75462 422 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC25A16P16260 332 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 ZNF43P17038 809 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 C3orf36Q3SXR2 165 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 GTDC1Q4AE62 458 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 LRIF1Q5T3J3 769 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 HMBOX1Q6NT76 420 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 C6orf89Q6UWU4 347 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 CREB3L2Q70SY1 520 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 WDR31Q8NA23 367 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 MAGEE2Q8TD90 523 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC38A4Q969I6 547 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 ZNF607Q96SK3 696 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 RABEP2Q9H5N1 569 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 FKBP7Q9Y680 259 aa13.55□□□□□ -0.24
CTDSP1-202ENST00000428361 HEATR1Q9H583 2144 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 VSTM5A8MXK1 200 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 AIM2O14862 343 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 SERPINB7O75635 380 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 CRYAAP02489 173 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 CDH2P19022 906 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 ATP4BP51164 291 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 BNIP2Q12982 314 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 FAM69AQ5T7M9 428 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 REEP3Q6NUK4 255 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 NIPAL3Q6P499 406 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC2A7Q6PXP3 512 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 LSMEM1Q8N8F7 131 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 EPYCQ99645 322 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 KATNB1Q9BVA0 655 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 TESQ9UGI8 421 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 GDF2Q9UK05 429 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 GMEB1Q9Y692 573 aa13.54□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC43A1O75387 559 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 IFNA2P01563 188 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 ARAFP10398 606 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 PRG2P13727 222 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC6A2P23975 617 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 P2RY4P51582 365 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 FOXG1P55316 489 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SNRPD2P62316 118 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 CDK6Q00534 326 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SPOCK1Q08629 439 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 TBRG1Q3YBR2 411 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 FAM91A1Q658Y4 838 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 ANKRD16Q6P6B7 361 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 CCDC36Q8IYA8 594 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 FAM169BQ8N8A8 192 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 MAL2Q969L2 176 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC25A36Q96CQ1 311 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC47A1Q96FL8 570 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 OXGR1Q96P68 337 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 SLC38A2Q96QD8 506 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 C1QTNF6Q9BXI9 259 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 TMEM38AQ9H6F2 299 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 CCDC167Q9P0B6 97 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 CORINQ9Y5Q5 1042 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 ABCA1O95477 2261 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms