RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 SLC6A8P48029 635 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 CARD18P57730 90 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FAM53BQ14153 422 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MFSD13AQ14CX5 517 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 HSD17B12Q53GQ0 312 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MEDAGQ5VYS4 303 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 NXNL2Q5VZ03 156 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PGBD2Q6P3X8 592 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FAM122CQ6P4D5 195 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 GPR155Q7Z3F1 870 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 KLHDC8BQ8IXV7 354 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 LINC00471Q8N535 108 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OR9K2Q8NGE7 335 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 SLC2A12Q8TD20 617 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 TNFAIP8L1Q8WVP5 186 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 DNASE2BQ8WZ79 361 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PDCD10Q9BUL8 212 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 C1QTNF6Q9BXI9 259 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 COMMD4Q9H0A8 199 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 MYNNQ9NPC7 610 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 A0A1W2PPK0 400 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 PRAMEF25A6NGN4 478 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 H0YIG0 161 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 AKR7A2O43488 359 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 SSX4O60224 188 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FASLGP48023 281 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 KCNJ10P78508 379 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 B4GALNT1Q00973 533 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 IL10RAQ13651 578 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 OR1C1Q15619 314 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FAM205BPQ63HN1 556 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 SLC16A12Q6ZSM3 486 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 FAM46AQ96IP4 442 aaKnown RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 DHRS9Q9BPW9 319 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 RANBP3Q9H6Z4 567 aaPredicted RBP9.82□□□□□ -0.84
TCOF1-204ENST00000427724 ASIC5Q9NY37 505 aa9.82□□□□□ -0.84
TCOF1-204ENST00000427724 IGHV5-10-1A0A0J9YXX1 117 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 TEX46H3BTG2 121 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 NKX2-8O15522 239 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 TP53P04637 393 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 POU3F3P20264 500 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 DDOSTP39656 456 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ILKQ13418 452 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 AAED1Q7RTV5 226 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 EXTL1Q92935 676 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 FUZQ9BT04 418 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 BTBD2Q9BX70 525 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 C11orf54Q9H0W9 315 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 DUSP13Q9UII6 198 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 PTPN13Q12923 2485 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 A0A1B0GVC2 190 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 A6NIN4 97 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF264O43296 627 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF208O43345 1280 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 FGF17O60258 216 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SFTPCP11686 197 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 MTNR1AP48039 350 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ARFIP1P53367 373 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 CAV3P56539 151 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF91Q05481 1191 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 BCL2A1Q16548 175 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 LINC00299Q6ZSB3 139 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 LANCL3Q6ZV70 420 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 KLBQ86Z14 1044 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SLC38A6Q8IZM9 456 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 FTMTQ8N4E7 242 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 GDPD1Q8N9F7 314 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 OR2T35Q8NGX2 323 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 BRIX1Q8TDN6 353 aaKnown RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SPRYD4Q8WW59 207 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 NDRG3Q9UGV2 375 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF639Q9UID6 485 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ALG5Q9Y673 324 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SLC22A7Q9Y694 548 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 PEX14O75381 377 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 TEAD1P28347 426 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SSPNQ14714 243 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 ZNF766Q5HY98 468 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 OR2G6Q5TZ20 316 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SLC25A25Q6KCM7 469 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 CNIH2Q6PI25 160 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 LRFN4Q6PJG9 635 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 NDUFAF7Q7L592 441 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 NRMQ8IXM6 262 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SAMD12Q8N8I0 201 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SAP25Q8TEE9 199 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 OSTF1Q92882 214 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 LINC00615Q96LM1 132 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 PIGQQ9BRB3 760 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 QRSL1Q9H0R6 528 aaKnown RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 FAM60AQ9NP50 221 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 TMPRSS11EQ9UL52 423 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 SLC35A3Q9Y2D2 325 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 NOSIPQ9Y314 301 aaKnown RBP9.81□□□□□ -0.84
TCOF1-204ENST00000427724 PCDHGB2Q9Y5G2 931 aa9.81□□□□□ -0.84
TCOF1-204ENST00000427724 PLPP1O14494 284 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 CSRP3P50461 194 aa9.8□□□□□ -0.84
TCOF1-204ENST00000427724 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms