RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CD46P15529 392 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 DSC1Q08554 894 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 NPSR1Q6W5P4 371 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 DPPA4Q7L190 304 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF551Q7Z340 670 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ENTHD1Q8IYW4 607 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 OR51A2Q8NGJ7 313 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 WDR76Q9H967 626 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 RAB22AQ9UL26 194 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 FAM96BQ9Y3D0 163 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 FBXO24O75426 580 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 CD276Q5ZPR3 534 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF251Q9BRH9 671 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 TMEM127O75204 238 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 JTBO76095 146 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ZIC2O95409 532 aaPredicted RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 BTG1P62324 171 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 GRB2P62993 217 aaKnown RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 COX15Q7KZN9 410 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ADGRG5Q8IZF4 528 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 LSMEM2Q8N112 164 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 DDX31Q9H8H2 851 aaKnown RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ACKR4Q9NPB9 350 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 ZNF586Q9NXT0 402 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 TRAPPC2LQ9UL33 140 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 RCE1Q9Y256 329 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 EIF1BO60739 113 aaKnown RBP13.47□□□□□ -0.25
PTPN13-203ENST00000427191 TNFSF8P32971 234 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 APIPQ96GX9 242 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 SLC22A12Q96S37 553 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 PTGDR2Q9Y5Y4 395 aa13.47□□□□□ -0.25
PTPN13-203ENST00000427191 CHRM4P08173 479 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 TACR1P25103 407 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 MTCP1P56278 107 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SLC35D3Q5M8T2 416 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 ACOT4Q8N9L9 421 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SCARB1Q8WTV0 552 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 BMP1P13497 986 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 RRADP55042 308 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LCN6P62502 163 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 RAB1AP62820 205 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SORDQ00796 357 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 EVX2Q03828 476 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 PIP5KL1Q5T9C9 394 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 OR2L13Q8N349 312 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CISD2Q8N5K1 135 aaKnown RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 EVPLQ92817 2033 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LAMA4Q16363 1823 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 POU3F3P20264 500 aaPredicted RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 KIR2DL3P43628 341 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 BAK1Q16611 211 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 ENTPD8Q5MY95 495 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 KLHDC1Q8N7A1 406 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SDR9C7Q8NEX9 313 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 KHSRPQ92945 711 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 HHIPL1Q96JK4 782 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LRFN5Q96NI6 719 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 WRAP73Q9P2S5 460 aaPredicted RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 YARS2Q9Y2Z4 477 aaKnown RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 NSA2O95478 260 aaKnown RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CER1O95813 267 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 ARAFP10398 606 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SELEP16581 610 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SPI1P17947 270 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 NR0B2Q15466 257 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 OR1Q1Q15612 314 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LETMD1Q6P1Q0 360 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LYPD4Q6UWN0 246 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 QRSL1Q9H0R6 528 aaKnown RBP13.46□□□□□ -0.25
PTPN13-203ENST00000427191 FAM53CQ9NYF3 392 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 GNG12Q9UBI6 72 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CORINQ9Y5Q5 1042 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 LOC100289279A0A1B0GTE1 492 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CPMP14384 443 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 CBLL1Q75N03 491 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 SLC35G3Q8N808 338 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 GATA6Q92908 595 aa13.46□□□□□ -0.25
PTPN13-203ENST00000427191 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.26
PTPN13-203ENST00000427191 VASNQ6EMK4 673 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 OR8J2Q8NGG1 315 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 TIMM29Q9BSF4 260 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 NDFIP1Q9BT67 221 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 KIR2DS1A0A191URI9 304 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 DHRS4L1P0CG22 281 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 KIR2DS4P43632 304 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 TAS2R45P59539 299 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 CHRNEQ04844 493 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 KIR2DS1Q14954 304 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 ZNF425Q6IV72 752 aa13.46□□□□□ -0.26
PTPN13-203ENST00000427191 Q6ZRG5 221 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms