RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RAB43Q86YS6 212 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 NPEPL1Q8NDH3 523 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 OR52E2Q8NGJ4 325 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 PSMF1Q92530 271 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 NKD1Q969G9 470 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 C1GALT1C1Q96EU7 318 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 MED20Q9H944 212 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 HPF1Q9NWY4 346 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 FBXL2Q9UKC9 423 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 VDAC3Q9Y277 283 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 PCNX3Q9H6A9 2034 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 GVINP1Q7Z2Y8 2422 aa13.75□□□□□ -0.21
ACTB-204ENST00000425660 A0A1W2PPW3 197 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 PROB1E7EW31 1015 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 MYL12BO14950 172 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 FZD7O75084 574 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 APOL3O95236 402 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 HIST1H2ABP04908 130 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 LIMS3P0CW19 117 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 LIMS4P0CW20 117 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 CCL3P10147 92 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 PAX7P23759 505 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 ADH6P28332 368 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 SDHAP31040 664 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 GABREP78334 506 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 AQP6Q13520 282 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 EMC4Q5J8M3 183 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 SLC22A10Q63ZE4 541 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 JMJD6Q6NYC1 403 aaPredicted RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 PAQR6Q6TCH4 344 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 HIST3H2AQ7L7L0 130 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 SIRT6Q8N6T7 355 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 CYB561A3Q8NBI2 242 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 ZNF485Q8NCK3 441 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 PSD4Q8NDX1 1056 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 OR4F15Q8NGB8 312 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 OR4K13Q8NH42 304 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 HIST1H2ACQ93077 130 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 IP6K3Q96PC2 410 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 OPALINQ96PE5 141 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 NMNAT2Q9BZQ4 307 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 NDEL1Q9GZM8 345 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 PTGES2Q9H7Z7 377 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 TAS2R5Q9NYW4 299 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 SLC22A1O15245 554 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 AHSA1O95433 338 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 CEACAM1P13688 526 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 ERVK-25P63136 954 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
ACTB-204ENST00000425660 ACER2Q5QJU3 275 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 ZNF468Q5VIY5 522 aaPredicted RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 IGF2-ASQ6U949 168 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 PLCZ1Q86YW0 608 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 OR5J2Q8NH18 312 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 POC1BQ8TC44 478 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 OR11A1Q9GZK7 315 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
ACTB-204ENST00000425660 CHCHD3Q9NX63 227 aaKnown RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 MRPS18BQ9Y676 258 aaKnown RBP13.74□□□□□ -0.21
ACTB-204ENST00000425660 MPDZO75970 2070 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 CCRL2O00421 344 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 CLUP10909 449 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 EIF1P41567 113 aaKnown RBP13.73□□□□□ -0.21
ACTB-204ENST00000425660 WNT4P56705 351 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 CTXN1P60606 82 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 MLLT11Q13015 90 aaPredicted RBP13.73□□□□□ -0.21
ACTB-204ENST00000425660 ATP1A4Q13733 1029 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 MFSD13AQ14CX5 517 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 KLHL12Q53G59 568 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 ATCAYQ86WG3 371 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 FAM98AQ8NCA5 519 aaKnown RBP13.73□□□□□ -0.21
ACTB-204ENST00000425660 OR51G2Q8NGK0 314 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 MFSD8Q8NHS3 518 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 DDIT4LQ96D03 193 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 MRPL39Q9NYK5 338 aaKnown RBP13.73□□□□□ -0.21
ACTB-204ENST00000425660 TNFRSF10DQ9UBN6 386 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 IL17BQ9UHF5 180 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 CORINQ9Y5Q5 1042 aa13.73□□□□□ -0.21
ACTB-204ENST00000425660 A0A087WZY1 265 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 TEX13CA0A0J9YWL9 993 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 OR6C68A6NDL8 312 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SNPHO15079 494 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 EFNA2O43921 213 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SNX4O95219 450 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 F13BP05160 661 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 HSMCR30P0CW71 290 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 POU4F2Q12837 409 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 GGTLC2Q14390 218 aa13.72□□□□□ -0.21
ACTB-204ENST00000425660 SPCS2Q15005 226 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms