RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ELMOD3Q96FG2 381 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 ORAI3Q9BRQ5 295 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 APOOQ9BUR5 198 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 ADAP2Q9NPF8 381 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 OR5V1Q9UGF6 321 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 GNG8Q9UK08 70 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 FLVCR2Q9UPI3 526 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 TBC1D3IA0A087WXS9 549 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 UBE2QL1A1L167 161 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 NPIPB9F8W1W9 429 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 H7C417 338 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 CYR61O00622 381 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 LDB3O75112 727 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 SERPINI2O75830 405 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 ALDOBP05062 364 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 FGF2P09038 288 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 GABRA3P34903 492 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 PRPS1P60891 318 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 STX4Q12846 297 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 Q499Y3 187 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 TMEM69Q5SWH9 247 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 ZNF595Q8IYB9 648 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 DND1Q8IYX4 353 aaKnown RBP13.95□□□□□ -0.18
C9orf3-204ENST00000424143 C1orf216Q8TAB5 229 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 SYNPRQ8TBG9 265 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 RNF166Q96A37 237 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-204ENST00000424143 SLC17A5Q9NRA2 495 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 FBXO34Q9NWN3 711 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 NKIRAS2Q9NYR9 191 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 CXXC1Q9P0U4 656 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-204ENST00000424143 MTFP1Q9UDX5 166 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 PFDN2Q9UHV9 154 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 CEP350Q5VT06 3117 aa13.95□□□□□ -0.18
C9orf3-204ENST00000424143 A0A1B0GW55 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 OTOL1A6NHN0 477 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 XRCC3O43542 346 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 RP2O75695 350 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SCO1O75880 301 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 ADRB1P08588 477 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L2P0CJ85 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L3P0CJ86 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L4P0CJ87 422 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L5P0CJ88 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L6P0CJ89 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4L7P0CJ90 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SLC35E2P0CK97 266 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 GABRA1P14867 456 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 CSF2RAP15509 400 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SPI1P17947 270 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 CSRP1P21291 193 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 VIPR2P41587 438 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 TAS2R20P59543 309 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 RPS4XP62701 263 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 RBMS2Q15434 407 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 LINC00303Q3SY05 128 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 RNASE12Q5GAN4 147 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 ALG10BQ5I7T1 473 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 PXDC1Q5TGL8 231 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SLC25A25Q6KCM7 469 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SLC16A9Q7RTY1 509 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 NUP54Q7Z3B4 507 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SYT9Q86SS6 491 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 ZNF440Q8IYI8 595 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 RFLNBQ8N5W9 214 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 OR4K13Q8NH42 304 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 POF1BQ8WVV4 589 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 SMARCD2Q92925 531 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 TOE1Q96GM8 510 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 ASB16Q96NS5 453 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 OR2M4Q96R27 311 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 PELOQ9BRX2 385 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 CRISPLD2Q9H0B8 497 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DNTTIP1Q9H147 329 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 LDAHQ9H6V9 325 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 MYOZ1Q9NP98 299 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 MED11Q9P086 117 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 DUX4Q9UBX2 424 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 CLEC4AQ9UMR7 237 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 PPIEQ9UNP9 301 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 YBX2Q9Y2T7 364 aaKnown RBP13.94□□□□□ -0.18
C9orf3-204ENST00000424143 ZNF337Q9Y3M9 751 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 PLEKHM1Q9Y4G2 1056 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 IER3IP1Q9Y5U9 82 aa13.94□□□□□ -0.18
C9orf3-204ENST00000424143 A0A087WUJ7 227 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 TRBV5-7A0A0A0MS05 114 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 TXNDC12O95881 172 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 PAK4O96013 591 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-204ENST00000424143 GYPBP06028 91 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 NGFRP08138 427 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 CSF1P09603 554 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 GMFBP60983 142 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 CBFBQ13951 182 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 UBXN2BQ14CS0 331 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 DEFB134Q4QY38 66 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 FAM78AQ5JUQ0 283 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 HES5Q5TA89 166 aa13.93□□□□□ -0.18
C9orf3-204ENST00000424143 LINC01590Q5TEZ4 76 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms