RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 CMTM5Q96DZ9 223 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 HS3ST6Q96QI5 342 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 EFCAB1Q9HAE3 211 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 RASD1Q9Y272 281 aa23.32■■□□□ 1.32
CDK9-202ENST00000421939 CPSF4LA6NMK7 179 aaKnown RBP23.31■■□□□ 1.32
CDK9-202ENST00000421939 KLF4O43474 513 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 NUDT2P50583 147 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 TAB1Q15750 504 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 ENTPD8Q5MY95 495 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 HACD2Q6Y1H2 254 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 MICU2Q8IYU8 434 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 ZIC4Q8N9L1 334 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 ZNF385AQ96PM9 386 aaKnown RBP23.31■■□□□ 1.32
CDK9-202ENST00000421939 EPYCQ99645 322 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 HOPXQ9BPY8 73 aaPredicted RBP23.31■■□□□ 1.32
CDK9-202ENST00000421939 PCDHAC1Q9H158 963 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 ASB6Q9NWX5 421 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 BAG5Q9UL15 447 aa23.31■■□□□ 1.32
CDK9-202ENST00000421939 PRR14LQ5THK1 2151 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 ELOVL7A1L3X0 281 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 CHP2O43745 196 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 IFNA14P01570 189 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 DNASE1P24855 282 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 SLC7A2P52569 658 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 IST1P53990 364 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 LRRC23Q53EV4 343 aaPredicted RBP23.3■■□□□ 1.32
CDK9-202ENST00000421939 ALKBH2Q6NS38 261 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 SLC15A3Q8IY34 581 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 ZNF433Q8N7K0 673 aaPredicted RBP23.3■■□□□ 1.32
CDK9-202ENST00000421939 ADAMTS16Q8TE57 1224 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 HSD17B8Q92506 261 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 TMEM43Q9BTV4 400 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 SEC14L4Q9UDX3 406 aa23.3■■□□□ 1.32
CDK9-202ENST00000421939 M0R082 166 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 RAF1P04049 648 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 GGT1P19440 569 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 PTNP21246 168 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 GRPRP30550 384 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 NR1H2P55055 460 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 FAPQ12884 760 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 STK11Q15831 433 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 C8orf82Q6P1X6 216 aaPredicted RBP23.29■■□□□ 1.32
CDK9-202ENST00000421939 AAED1Q7RTV5 226 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 CARM1Q86X55 608 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 LURAP1LQ8IV03 231 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 OR6S1Q8NH40 331 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 ZNF417Q8TAU3 575 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 ZNF587Q96SQ5 575 aaPredicted RBP23.29■■□□□ 1.32
CDK9-202ENST00000421939 CCM2LQ9NUG4 571 aaPredicted RBP23.29■■□□□ 1.32
CDK9-202ENST00000421939 TAS2R16Q9NYV7 291 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 UPB1Q9UBR1 384 aa23.29■■□□□ 1.32
CDK9-202ENST00000421939 TRAPPC13A5PLN9 417 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 PRDX6P30041 224 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 KDELR2P33947 212 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 LIPEQ05469 1076 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 MFSD13AQ14CX5 517 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 TESK1Q15569 626 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 CYBRD1Q53TN4 286 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 TSPO2Q5TGU0 170 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 CREB3L2Q70SY1 520 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 TSPYL5Q86VY4 417 aaPredicted RBP23.28■■□□□ 1.32
CDK9-202ENST00000421939 PLPPR2Q96GM1 343 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 SLC7A10Q9NS82 523 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 GMPR2Q9P2T1 348 aaKnown RBP23.28■■□□□ 1.32
CDK9-202ENST00000421939 B3GALT5Q9Y2C3 310 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 SH3GLB1Q9Y371 365 aa23.28■■□□□ 1.32
CDK9-202ENST00000421939 NME4O00746 187 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 ATE1O95260 518 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 LYPD3O95274 346 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 THY1P04216 161 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 TNFRSF1BP20333 461 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 CBLP22681 906 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 ART1P52961 327 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 KEAP1Q14145 624 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 TIMM23BQ5SRD1 257 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 LINC00114Q6XXX2 140 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 EPHX4Q8IUS5 362 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 ADPRHL1Q8NDY3 354 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 SLCO5A1Q9H2Y9 848 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 NGBQ9NPG2 151 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 CORINQ9Y5Q5 1042 aa23.27■■□□□ 1.32
CDK9-202ENST00000421939 CIB4A0PJX0 185 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 OR5H1A6NKK0 313 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 PDLIM1O00151 329 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 RAD51DO75771 328 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 BGLAPP02818 100 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 ITGA5P08648 1049 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 FOXG1P55316 489 aaPredicted RBP23.26■■□□□ 1.31
CDK9-202ENST00000421939 SEZ6L2Q6UXD5 910 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 WDR88Q6ZMY6 472 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 H1FNTQ75WM6 255 aaPredicted RBP23.26■■□□□ 1.31
CDK9-202ENST00000421939 P2RY8Q86VZ1 359 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 KDM8Q8N371 416 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 POMGNT2Q8NAT1 580 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 B3GAT1Q9P2W7 334 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 SLC7A7Q9UM01 511 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 ARL2BPQ9Y2Y0 163 aa23.26■■□□□ 1.31
CDK9-202ENST00000421939 NDUFAB1O14561 156 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 ZNF43P17038 809 aa23.25■■□□□ 1.31
CDK9-202ENST00000421939 PPA1Q15181 289 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms