RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 IGLV1-44P01699 117 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 CRYAAP02489 173 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 PGRP06401 933 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 ADRA2AP08913 450 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 NR2F1P10589 423 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 ETFAP13804 333 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 TCN1P20061 433 aaPredicted RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 HNF1AP20823 631 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 CBLP22681 906 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 FKBP2P26885 142 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 APEX1P27695 318 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 S100A3P33764 101 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SERPINB5P36952 375 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SRP14P37108 136 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 ROR2Q01974 943 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 RUNX1T1Q06455 604 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SQLEQ14534 574 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 ADRM1Q16186 407 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 GTDC1Q4AE62 458 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 PHYHD1Q5SRE7 291 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 C1orf140Q5VVS0 124 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 LIPNQ5VXI9 398 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 ATG16L1Q676U5 607 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 KRT80Q6KB66 452 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 LRRC74BQ6ZQY2 392 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 RINLQ6ZS11 566 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SERPINA11Q86U17 422 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 WDFY1Q8IWB7 410 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 POMGNT2Q8NAT1 580 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 OR52P1PQ8NH57 321 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 TESCQ96BS2 214 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SLC25A36Q96CQ1 311 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 BOD1Q96IK1 185 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 CCDC115Q96NT0 180 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 PANX1Q96RD7 426 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SORT1Q99523 831 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 KCNS3Q9BQ31 491 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 SF3B5Q9BWJ5 86 aaKnown RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 RSPO3Q9BXY4 272 aaPredicted RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 PLA2G12AQ9BZM1 189 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 LPAR2Q9HBW0 351 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 CRNNQ9UBG3 495 aaPredicted RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 TMEFF2Q9UIK5 374 aaPredicted RBP7.01□□□□□ -1.29
VIM-202ENST00000421459 BTNL2Q9UIR0 455 aa7.01□□□□□ -1.29
VIM-202ENST00000421459 ARPC4-TTLL3A0A0A6YYG9 625 aa7□□□□□ -1.29
VIM-202ENST00000421459 IGHV2OR16-5A0A0B4J2B6 119 aa7□□□□□ -1.29
VIM-202ENST00000421459 CDHR4A6H8M9 788 aa7□□□□□ -1.29
VIM-202ENST00000421459 OR6C65A6NJZ3 312 aa7□□□□□ -1.29
VIM-202ENST00000421459 E9PBE3 544 aa7□□□□□ -1.29
VIM-202ENST00000421459 FAAHO00519 579 aa7□□□□□ -1.29
VIM-202ENST00000421459 TCF21O43680 179 aa7□□□□□ -1.29
VIM-202ENST00000421459 SERPINE1P05121 402 aa7□□□□□ -1.29
VIM-202ENST00000421459 DBIP07108 87 aaKnown RBP7□□□□□ -1.29
VIM-202ENST00000421459 TACSTD2P09758 323 aa7□□□□□ -1.29
VIM-202ENST00000421459 NUDT17P0C025 328 aa7□□□□□ -1.29
VIM-202ENST00000421459 TFPTP0C1Z6 253 aa7□□□□□ -1.29
VIM-202ENST00000421459 LBPP18428 481 aa7□□□□□ -1.29
VIM-202ENST00000421459 BGNP21810 368 aa7□□□□□ -1.29
VIM-202ENST00000421459 COL8A2P25067 703 aa7□□□□□ -1.29
VIM-202ENST00000421459 GIFP27352 417 aa7□□□□□ -1.29
VIM-202ENST00000421459 CFPP27918 469 aa7□□□□□ -1.29
VIM-202ENST00000421459 RPS5P46782 204 aaKnown RBP7□□□□□ -1.29
VIM-202ENST00000421459 SLC1A6P48664 564 aa7□□□□□ -1.29
VIM-202ENST00000421459 PPOXP50336 477 aa7□□□□□ -1.29
VIM-202ENST00000421459 MVDP53602 400 aa7□□□□□ -1.29
VIM-202ENST00000421459 CLDN17P56750 224 aa7□□□□□ -1.29
VIM-202ENST00000421459 VSNL1P62760 191 aa7□□□□□ -1.29
VIM-202ENST00000421459 IFFO1Q0D2I5 559 aa7□□□□□ -1.29
VIM-202ENST00000421459 NPRL3Q12980 569 aa7□□□□□ -1.29
VIM-202ENST00000421459 MPP2Q14168 576 aa7□□□□□ -1.29
VIM-202ENST00000421459 EFNB3Q15768 340 aa7□□□□□ -1.29
VIM-202ENST00000421459 SMU1Q2TAY7 513 aa7□□□□□ -1.29
VIM-202ENST00000421459 PRAMEF8Q5VWM4 474 aa7□□□□□ -1.29
VIM-202ENST00000421459 PRAMEF7Q5VXH5 474 aa7□□□□□ -1.29
VIM-202ENST00000421459 CARD17Q5XLA6 110 aa7□□□□□ -1.29
VIM-202ENST00000421459 MDP1Q86V88 176 aa7□□□□□ -1.29
VIM-202ENST00000421459 LRP11Q86VZ4 500 aa7□□□□□ -1.29
VIM-202ENST00000421459 CMIPQ8IY22 773 aa7□□□□□ -1.29
VIM-202ENST00000421459 EIF1ADQ8N9N8 165 aaKnown RBP7□□□□□ -1.29
VIM-202ENST00000421459 LINC01356Q8N9X3 169 aa7□□□□□ -1.29
VIM-202ENST00000421459 VPS37AQ8NEZ2 397 aa7□□□□□ -1.29
VIM-202ENST00000421459 KTI12Q96EK9 354 aaPredicted RBP7□□□□□ -1.29
VIM-202ENST00000421459 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
VIM-202ENST00000421459 OR52E6Q96RD3 313 aa7□□□□□ -1.29
VIM-202ENST00000421459 PTDSS2Q9BVG9 487 aa7□□□□□ -1.29
VIM-202ENST00000421459 TAPBPLQ9BX59 468 aa7□□□□□ -1.29
VIM-202ENST00000421459 RAB1BQ9H0U4 201 aa7□□□□□ -1.29
VIM-202ENST00000421459 OCEL1Q9H607 264 aa7□□□□□ -1.29
VIM-202ENST00000421459 WDR55Q9H6Y2 383 aaPredicted RBP7□□□□□ -1.29
VIM-202ENST00000421459 NOX3Q9HBY0 568 aa7□□□□□ -1.29
VIM-202ENST00000421459 GPR35Q9HC97 309 aa7□□□□□ -1.29
VIM-202ENST00000421459 FZR1Q9UM11 496 aa7□□□□□ -1.29
VIM-202ENST00000421459 ZNF443Q9Y2A4 671 aaPredicted RBP7□□□□□ -1.29
VIM-202ENST00000421459 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
VIM-202ENST00000421459 NUP214P35658 2090 aaPredicted RBP6.99□□□□□ -1.29
VIM-202ENST00000421459 A8MVM7 634 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 FAM157AC9JC47 383 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 FTCDNL1E5RQL4 147 aa6.99□□□□□ -1.29
VIM-202ENST00000421459 NPIPB7O75200 414 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms