RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 HAVCR2Q8TDQ0 301 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 KAT2AQ92830 837 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 RAB8BQ92930 207 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 ELP4Q96EB1 424 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 OR2A7Q96R45 310 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 ABHD1Q96SE0 405 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 SLC19A3Q9BZV2 496 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 RAB33BQ9H082 229 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 SLC25A32Q9H2D1 315 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 SPATA2Q9UM82 520 aa13.6□□□□□ -0.23
SEMA4D-204ENST00000420101 PATE3B3GLJ2 98 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 MCRIP1C9JLW8 97 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 LRRTM2O43300 516 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 SELENOFO60613 162 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 BCHEP06276 602 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 GIMD1P0DJR0 217 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 NAT2P11245 290 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 ANXA11P50995 505 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 MECP2P51608 486 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 ZP1P60852 638 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 DUSP2Q05923 314 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 KLF9Q13886 244 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 KCNAB1Q14722 419 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 ETFDHQ16134 617 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 TRIM61Q5EBN2 209 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 AADACL4Q5VUY2 407 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 SMARCD3Q6STE5 483 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 DEF8Q6ZN54 512 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 KANSL1Q7Z3B3 1105 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 WDR53Q7Z5U6 358 aaPredicted RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 RABEPKQ7Z6M1 372 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 IQCF1Q8N6M8 205 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 LINC00469Q8N7U9 141 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 OR56A1Q8NGH5 318 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 XAGE5Q8WWM1 108 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 OSTF1Q92882 214 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 PRRC1Q96M27 445 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 UTP23Q9BRU9 249 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 ZNF649Q9BS31 505 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 OR51I1Q9H343 314 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 EQTNQ9NQ60 294 aa13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 PURGQ9UJV8 347 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
SEMA4D-204ENST00000420101 PCP4L1A6NKN8 68 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 YKT6O15498 198 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 EMC8O43402 210 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 LDB3O75112 727 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 OR12D1P0DN82 309 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 MC3RP41968 323 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 FGL1Q08830 312 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 MADCAM1Q13477 382 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 LTB4RQ15722 352 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 PRTGQ2VWP7 1150 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 ZC3H14Q6PJT7 736 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 CXXC5Q7LFL8 322 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 METTL27Q8N6F8 245 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 MORN4Q8NDC4 146 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 NUP43Q8NFH3 380 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 OR2I1PQ8NGU4 316 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 SAP25Q8TEE9 199 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 C15orf40Q8WUR7 153 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 MOAP1Q96BY2 351 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 TMEM19Q96HH6 336 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 ZC3H10Q96K80 434 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 TRIM36Q9NQ86 728 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.24
SEMA4D-204ENST00000420101 CCDC88CQ9P219 2028 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 TRABD2BA6NFA1 517 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 CD8B2A6NJW9 211 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 TMEM150CB9EJG8 249 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 H7C2Y5 167 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 CD8BP10966 210 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 PSMB1P20618 241 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 KHKP50053 298 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 RAB38P57729 211 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 HSD11B2P80365 405 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 MRPS10P82664 201 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 GNA13Q14344 377 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 LASP1Q14847 261 aaKnown RBP13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 CCDC157Q569K6 752 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 TMEM64Q6YI46 380 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 OR5D16Q8NGK9 328 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 OR4C6Q8NH72 309 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 SFXN5Q8TD22 340 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 SMIM4Q8WVI0 70 aa13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 SPRYD4Q8WW59 207 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-204ENST00000420101 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms