RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 OR5J2Q8NH18 312 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 FNDC9Q8TBE3 224 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 ROBO4Q8WZ75 1007 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 NRBF2Q96F24 287 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
TRIM48-201ENST00000417545 TM9SF2Q99805 663 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 TEX12Q9BXU0 123 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 SRXN1Q9BYN0 137 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 KRT84Q9NSB2 600 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 VNN3Q9NY84 501 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 KLHL9Q9P2J3 617 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 KLHL13Q9P2N7 655 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 ENOPH1Q9UHY7 261 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 TINAGQ9UJW2 476 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 EMC9Q9Y3B6 208 aa7.59□□□□□ -1.19
TRIM48-201ENST00000417545 DNAJC13O75165 2243 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 A0A1B0GUH1 482 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 A0A1W2PRG6 482 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 LRRN3E7EW58 273 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 H3BN98 237 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 H3BNX3 289 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 CCL21O00585 134 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 NPIPB7O75200 414 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 WISP2O76076 250 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 VAMP5O95183 116 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 RCBTB2O95199 551 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 ADAP00813 363 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 IGF2P01344 180 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF43P17038 809 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 GNLYP22749 145 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 POU1F1P28069 291 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 HMGA2P52926 109 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 PRPS1P60891 318 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 SIRPAP78324 504 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 POU3F1Q03052 451 aaPredicted RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 PUDPQ08623 228 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 IGFBP7Q16270 282 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 EIF2S3LQ2VIR3 472 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 CTU2Q2VPK5 515 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 IQCCQ4KMZ1 466 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 EEF1A1P5Q5VTE0 462 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 NSUN5P2Q63ZY6 315 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 RPL13AP3Q6NVV1 102 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 PGBD2Q6P3X8 592 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 MTFR2Q6P444 385 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 PAQR6Q6TCH4 344 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 H1FNTQ75WM6 255 aaPredicted RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 HDDC2Q7Z4H3 204 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 FGD2Q7Z6J4 655 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 FJX1Q86VR8 437 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 DOLPP1Q86YN1 238 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 UEVLDQ8IX04 471 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 TMEM99Q8N816 258 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 CNEP1R1Q8N9A8 125 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 SCAIQ8N9R8 606 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 OR4C15Q8NGM1 316 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 OR13C2Q8NGS9 318 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 OR51A7Q8NH64 312 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 DNAJC9Q8WXX5 260 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 WNT2BQ93097 391 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 ADGRG7Q96K78 797 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 MOGAT1Q96PD6 335 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 BARD1Q99728 777 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 CIB1Q99828 191 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 TACO1Q9BSH4 297 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 ZNF426Q9BUY5 554 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 PTDSS2Q9BVG9 487 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 VCX3BQ9H321 246 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 CALHM2Q9HA72 323 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 MEPEQ9NQ76 525 aaPredicted RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 C20orf141Q9NUB4 165 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 TBC1D23Q9NUY8 699 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 MRPL39Q9NYK5 338 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 RALYQ9UKM9 306 aaKnown RBP7.58□□□□□ -1.2
TRIM48-201ENST00000417545 OAZ3Q9UMX2 235 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 RASD1Q9Y272 281 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 B3GALT5Q9Y2C3 310 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 POFUT2Q9Y2G5 429 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 ARHGAP21Q5T5U3 1957 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 SVILO95425 2214 aa7.58□□□□□ -1.2
TRIM48-201ENST00000417545 GTF3C1Q12789 2109 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ITPR1Q14643 2758 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TRAV27A0A087WT01 109 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 ARRDC5A6NEK1 342 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 CD8B2A6NJW9 211 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 GPR171O14626 319 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 SMAD9O15198 467 aaKnown RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 KRT33AO76009 404 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 NDUFB2O95178 105 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 TMIGD3P0DMS9 266 aaPredicted RBP7.57□□□□□ -1.2
TRIM48-201ENST00000417545 MAKP20794 623 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 PRKACGP22612 351 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 IGFBP5P24593 272 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 FPR3P25089 353 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 NOS3P29474 1203 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 CA7P43166 264 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 OMPP47874 163 aa7.57□□□□□ -1.2
TRIM48-201ENST00000417545 RAD23AP54725 363 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms