RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LRRC23Q53EV4 343 aaPredicted RBP15.89■□□□□ 0.13
VCP-202ENST00000417448 FAM91A1Q658Y4 838 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 ADAM5Q6NVV9 412 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 CCDC80Q76M96 950 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.89■□□□□ 0.13
VCP-202ENST00000417448 GRINAQ7Z429 371 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 PATL1Q86TB9 770 aaKnown RBP15.89■□□□□ 0.13
VCP-202ENST00000417448 GTPBP3Q969Y2 492 aaKnown RBP15.89■□□□□ 0.13
VCP-202ENST00000417448 NSL1Q96IY1 281 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 ARL5BQ96KC2 179 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 ADAM19Q9H013 955 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 ARMC7Q9H6L4 198 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 TMEM160Q9NX00 188 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 EGFL7Q9UHF1 273 aa15.89■□□□□ 0.13
VCP-202ENST00000417448 B2RBV5 119 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 TMEM229AB2RXF0 380 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 ADAMDEC1O15204 470 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 GSTA4O15217 222 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 TCN1P20061 433 aaPredicted RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 ELK4P28324 431 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 THBS2P35442 1172 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 APOBEC1P41238 236 aaKnown RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 POLR2HP52434 150 aaKnown RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 RGS8P57771 180 aaPredicted RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 EEFSECP57772 596 aaKnown RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 RPS3AP61247 264 aaKnown RBP15.88■□□□□ 0.13
VCP-202ENST00000417448 KRT72Q14CN4 511 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 NPTX1Q15818 432 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 WBP2NLQ6ICG8 309 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 ESPNLQ6ZVH7 1005 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 ARPINQ7Z6K5 226 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 SLC30A8Q8IWU4 369 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 FBXW5Q969U6 566 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 KCNK17Q96T54 332 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 CDRT15Q96T59 188 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 PRRG4Q9BZD6 226 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 ALG2Q9H553 416 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 SERINC1Q9NRX5 453 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 TMEM181Q9P2C4 612 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 STOML1Q9UBI4 398 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 SLC13A4Q9UKG4 626 aa15.88■□□□□ 0.13
VCP-202ENST00000417448 PRORSD1PA6NEY8 169 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 FAAHO00519 579 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 CXCR6O00574 342 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 KCNAB3O43448 404 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 LGI1O95970 557 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 FESP07332 822 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 SLC7A1P30825 629 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 KDELR2P33947 212 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 COPZ1P61923 177 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 FAPQ12884 760 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 CYBRD1Q53TN4 286 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 INTS11Q5TA45 600 aaKnown RBP15.87■□□□□ 0.13
VCP-202ENST00000417448 C3orf33Q6P1S2 294 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 ERICH5Q6P6B1 374 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 FAM214BQ7L5A3 538 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 TSPYL5Q86VY4 417 aaPredicted RBP15.87■□□□□ 0.13
VCP-202ENST00000417448 DEFB107AQ8IZN7 70 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 ARIH2OSQ8N7S6 290 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 OR52E4Q8NGH9 312 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 OR6T1Q8NGN1 323 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 RNF217Q8TC41 542 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 SMAP2Q8WU79 429 aaPredicted RBP15.87■□□□□ 0.13
VCP-202ENST00000417448 C3orf49Q96BT1 292 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 TPD52L3Q96J77 140 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 ARHGDIGQ99819 225 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 KCTD14Q9BQ13 255 aaPredicted RBP15.87■□□□□ 0.13
VCP-202ENST00000417448 ACTR6Q9GZN1 396 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 ABCD2Q9UBJ2 740 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 ZNF175Q9Y473 711 aa15.87■□□□□ 0.13
VCP-202ENST00000417448 A0A1B0GWA3 101 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 SYNGR4O95473 234 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 UQCRBP14927 111 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 ENPP1P22413 925 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 CXCR1P25024 350 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 OR1E2P47887 323 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 OR1Q1Q15612 314 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 NRF1Q16656 503 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 ZSWIM7Q19AV6 140 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 PGGHGQ32M88 737 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 SYT14P1Q58G82 188 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 ZNF775Q96BV0 537 aaPredicted RBP15.86■□□□□ 0.13
VCP-202ENST00000417448 MCHR1Q99705 422 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 PLSCR4Q9NRQ2 329 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 RPS6KB2Q9UBS0 482 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 LPAR3Q9UBY5 353 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 SH3GLB1Q9Y371 365 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 RNF115Q9Y4L5 304 aa15.86■□□□□ 0.13
VCP-202ENST00000417448 MGAM2Q2M2H8 2515 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 CPSF4LA6NMK7 179 aaKnown RBP15.85■□□□□ 0.13
VCP-202ENST00000417448 CLOCKO15516 846 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 UBOX5O94941 541 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 IMPDH2P12268 514 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 OR2B6P58173 313 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 VLDLRP98155 873 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 PDSS1Q5T2R2 415 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 ALKBH2Q6NS38 261 aa15.85■□□□□ 0.13
VCP-202ENST00000417448 VTCN1Q7Z7D3 282 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms