RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 WNT11O96014 354 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 POLR2JP52435 117 aaKnown RBP13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 EFNA4P52798 201 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 CHRNB3Q05901 458 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 LOXL1Q08397 574 aaPredicted RBP13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 LARS2Q15031 903 aaKnown RBP13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 SWI5Q1ZZU3 235 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 CHRFAM7AQ494W8 412 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 NIPAL3Q6P499 406 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 PODNL1Q6PEZ8 512 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 KLHL24Q6TFL4 600 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 C3orf49Q96BT1 292 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 REPIN1Q9BWE0 567 aaKnown RBP13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 SEC14L4Q9UDX3 406 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 ZNF232Q9UNY5 417 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 PCDHB14Q9Y5E9 798 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 PMF1-BGLAPU3KQ54 211 aa13.6□□□□□ -0.23
RHBDF1-202ENST00000417043 A0A0G2JPF8 293 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 HNRNPCL2B2RXH8 293 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 HNRNPCL3B7ZW38 293 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 UBDO15205 165 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 F12P00748 615 aaPredicted RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 HNRNPCL4P0DMR1 293 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SLC25A16P16260 332 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 MAGOHP61326 146 aaKnown RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 EGR4Q05215 589 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 RGNQ15493 299 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 RNF220Q5VTB9 566 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 PRAMEF8Q5VWM4 474 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 PRAMEF7Q5VXH5 474 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 ITCHQ96J02 903 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SORCS2Q96PQ0 1159 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 KCNK17Q96T54 332 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 PTDSS2Q9BVG9 487 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SPATA9Q9BWV2 254 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 RMND5AQ9H871 391 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SEC61A2Q9H9S3 476 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SDR39U1Q9NRG7 319 aaPredicted RBP13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 ZIM2Q9NZV7 527 aa13.59□□□□□ -0.23
RHBDF1-202ENST00000417043 SVEP1Q4LDE5 3571 aa13.58□□□□□ -0.23
RHBDF1-202ENST00000417043 FTCDNL1E5RQL4 147 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 ZNF587BE7ETH6 402 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 IFNA2P01563 188 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 IGHV4-31P0DP07 118 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 VLDLRP98155 873 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 ANKRD16Q6P6B7 361 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 VHLLQ6RSH7 139 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 CROCCP2Q86T23 111 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 PHC2Q8IXK0 858 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 ARIH2OSQ8N7S6 290 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 ANKS4BQ8N8V4 417 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 GTF2H4Q92759 462 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 KTI12Q96EK9 354 aaPredicted RBP13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 SLC38A2Q96QD8 506 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 PRR14Q9BWN1 585 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 NELFAQ9H3P2 528 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 PIF1Q9H611 641 aa13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.58□□□□□ -0.24
RHBDF1-202ENST00000417043 CLIC1O00299 241 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 VAMP5O95183 116 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 AHSA1O95433 338 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 CELA3BP08861 270 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 PNMTP11086 282 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 BMP4P12644 408 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 ZNF16P17020 682 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 USF1P22415 310 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 CBLP22681 906 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 CLDN17P56750 224 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 ROR2Q01974 943 aaKnown RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 CYB5R2Q6BCY4 276 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 ABHD12BQ7Z5M8 362 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 MYPOPQ86VE0 399 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 C10orf111Q8N326 155 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 STK35Q8TDR2 534 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 PROX1Q92786 737 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 ZNF837Q96EG3 531 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 BOD1Q96IK1 185 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 SLAMF8Q9P0V8 285 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 IFT52Q9Y366 437 aa13.57□□□□□ -0.24
RHBDF1-202ENST00000417043 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
RHBDF1-202ENST00000417043 CECR9P0C854 216 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms