RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ASRGL1Q7L266 308 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 GTF2IRD2Q86UP8 949 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 MICU2Q8IYU8 434 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 ANKFN1Q8N957 763 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 OR2T12Q8NG77 320 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 RHNO1Q9BSD3 238 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 THTPAQ9BU02 230 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 CADM1Q9BY67 442 aaKnown RBP11.35□□□□□ -0.59
LINC00339-202ENST00000416769 HOXD1Q9GZZ0 328 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 LRMDAQ9H2I8 198 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 PIF1Q9H611 641 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-202ENST00000416769 BCO1Q9HAY6 547 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 KCNE5Q9UJ90 142 aa11.35□□□□□ -0.59
LINC00339-202ENST00000416769 SLC35F4A4IF30 521 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 C5orf58C9J3I9 102 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 NPIPB9F8W1W9 429 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 PGM3O95394 542 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 F12P00748 615 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 BCHEP06276 602 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 FESP07332 822 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 C8BP07358 591 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 PABPC4LP0CB38 370 aaKnown RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 ATP6V1C1P21283 382 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 IGFBP5P24593 272 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 TTKP33981 857 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 PCGF2P35227 344 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 P2RX1P51575 399 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 CCR4P51679 360 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 CHRNEQ04844 493 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 RASGEF1BQ0VAM2 473 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 FUT5Q11128 374 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 CEACAM7Q14002 265 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 SCARB2Q14108 478 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 INTS11Q5TA45 600 aaKnown RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 TYW3Q6IPR3 259 aaKnown RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 PGM2L1Q6PCE3 622 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 HMGN2P46Q86SG4 172 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 TMCO5AQ8N6Q1 288 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 HIPK4Q8NE63 616 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 MAL2Q969L2 176 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 TNFRSF13CQ96RJ3 184 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 KCNK17Q96T54 332 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 KCTD14Q9BQ13 255 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-202ENST00000416769 C19orf24Q9BVV8 132 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 ZNF350Q9GZX5 532 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 SLC38A1Q9H2H9 487 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 NGBQ9NPG2 151 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 WDR45Q9Y484 360 aa11.34□□□□□ -0.59
LINC00339-202ENST00000416769 OR5H1A6NKK0 313 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 FCMRO60667 390 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 CYTIPO60759 359 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 CHRM4P08173 479 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 ETS2P15036 469 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 GGT1P19440 569 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 SLC7A1P30825 629 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 PGM1P36871 562 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 EIF1P41567 113 aaKnown RBP11.33□□□□□ -0.6
LINC00339-202ENST00000416769 ATP12AP54707 1039 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 HPCAP84074 193 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 VLDLRP98155 873 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 FXNQ16595 210 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 C9orf135Q5VTT2 229 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 FRRS1Q6ZNA5 592 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 RNF148Q8N7C7 305 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 OIT3Q8WWZ8 545 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 MCUR1Q96AQ8 359 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 MRGPRX4Q96LA9 322 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 BARX1Q9HBU1 254 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-202ENST00000416769 TIGARQ9NQ88 270 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 KLHL9Q9P2J3 617 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
LINC00339-202ENST00000416769 MKLN1Q9UL63 735 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 USP22Q9UPT9 525 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 ANGPT4Q9Y264 503 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
LINC00339-202ENST00000416769 GPC6Q9Y625 555 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-202ENST00000416769 M0R1B8 84 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GTPBP1O00178 669 aaKnown RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GSTA4O15217 222 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CYP7B1O75881 506 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 CD40P25942 277 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 PCBP3P57721 371 aaKnown RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 RAC3P60763 192 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 LOXL1Q08397 574 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 BNIP2Q12982 314 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 SELENBP1Q13228 472 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
LINC00339-202ENST00000416769 GPR68Q15743 365 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 ZNF141Q15928 474 aa11.32□□□□□ -0.6
LINC00339-202ENST00000416769 TIMM23BQ5SRD1 257 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms