RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PDCD4Q53EL6 469 aaKnown RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 OR1K1Q8NGR3 316 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 SLC38A5Q8WUX1 472 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 ALKBH3Q96Q83 286 aaPredicted RBP12.59□□□□□ -0.39
PAF1-202ENST00000416728 SLC38A2Q96QD8 506 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 RMND5AQ9H871 391 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 TPT1P8Q9HAU6 139 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 THAP1Q9NVV9 213 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 LPAR3Q9UBY5 353 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
PAF1-202ENST00000416728 SLCO1B7G3V0H7 640 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 AHSA1O95433 338 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 CRYAAP02489 173 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 TFPTP0C1Z6 253 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 KITP10721 976 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 PRG2P13727 222 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 SELENOPP49908 381 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 PDLIM4P50479 330 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 P2RY4P51582 365 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
PAF1-202ENST00000416728 LGALS3BPQ08380 585 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 MST1LQ2TV78 715 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
PAF1-202ENST00000416728 NIPAL3Q6P499 406 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 CROCCP2Q86T23 111 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 ITCHQ96J02 903 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 SORCS2Q96PQ0 1159 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
PAF1-202ENST00000416728 PIMREGQ9BSJ6 248 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 KATNB1Q9BVA0 655 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 SHARPINQ9H0F6 387 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 CA10Q9NS85 328 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 THUMPD1Q9NXG2 353 aaKnown RBP12.58□□□□□ -0.4
PAF1-202ENST00000416728 RASD1Q9Y272 281 aa12.58□□□□□ -0.4
PAF1-202ENST00000416728 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 NDUFS8O00217 210 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 LMX1BO60663 402 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
PAF1-202ENST00000416728 SNNO75324 88 aaPredicted RBP12.57□□□□□ -0.4
PAF1-202ENST00000416728 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 SERPINF1P36955 418 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 GZMKP49863 264 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 WDR4P57081 412 aaKnown RBP12.57□□□□□ -0.4
PAF1-202ENST00000416728 GGTLC2Q14390 218 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 C6orf10Q5SRN2 563 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 ATG16L1Q676U5 607 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 SLC46A3Q7Z3Q1 461 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 STK35Q8TDR2 534 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
PAF1-202ENST00000416728 SPATA9Q9BWV2 254 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 MOV10Q9HCE1 1003 aaKnown RBP12.57□□□□□ -0.4
PAF1-202ENST00000416728 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 IFT52Q9Y366 437 aa12.57□□□□□ -0.4
PAF1-202ENST00000416728 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 TMEM120BA0PK00 339 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 TMEM229AB2RXF0 380 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 NPIPB7O75200 414 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 UPK3AO75631 287 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 PDE5AO76074 875 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 GTF2E2P29084 291 aaKnown RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 NR4A2P43354 598 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 NAAAQ02083 359 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 CARTPTQ16568 116 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 ZNF311Q5JNZ3 666 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 ANKRD16Q6P6B7 361 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 MSANTD1Q6ZTZ1 278 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 EPHX4Q8IUS5 362 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 MFSD8Q8NHS3 518 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 MAGEE2Q8TD90 523 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 MGARPQ8TDB4 240 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 SLC25A36Q96CQ1 311 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 MAELQ96JY0 434 aaKnown RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 LINC00470Q9BZP3 86 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 MYOZ1Q9NP98 299 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 SDR39U1Q9NRG7 319 aaPredicted RBP12.56□□□□□ -0.4
PAF1-202ENST00000416728 KCNS2Q9ULS6 477 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 CHST2Q9Y4C5 530 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 A0A096LPE4 126 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 A0A1W2PPZ6 126 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 LOC390937A0A1W2PQ73 354 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 VWC2LB2RUY7 222 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 B9A039 149 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 FTCDNL1E5RQL4 147 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 NR5A2O00482 541 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 OR4A8P0C604 315 aa12.56□□□□□ -0.4
PAF1-202ENST00000416728 CECR9P0C854 216 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms