RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 SEC14L4Q9UDX3 406 aa17.69■□□□□ 0.42
CTTN-205ENST00000415461 TESQ9UGI8 421 aaKnown RBP17.69■□□□□ 0.42
CTTN-205ENST00000415461 USF3Q68DE3 2245 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 IGKV1D-42A0A075B6H8 117 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 H7C1Q1 480 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 SERPINB7O75635 380 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 GTF2E2P29084 291 aaKnown RBP17.68■□□□□ 0.42
CTTN-205ENST00000415461 SELENOPP49908 381 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 ATP5J2P56134 94 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 PCBP3P57721 371 aaKnown RBP17.68■□□□□ 0.42
CTTN-205ENST00000415461 RGS8P57771 180 aaPredicted RBP17.68■□□□□ 0.42
CTTN-205ENST00000415461 NCALDP61601 193 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 SLC25A3Q00325 362 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 LGALS3BPQ08380 585 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 NFYCQ13952 458 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 PGGHGQ32M88 737 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 OR7E24Q6IFN5 339 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 CREB3L2Q70SY1 520 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 BIVMQ86UB2 503 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 EPHX4Q8IUS5 362 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 KDM8Q8N371 416 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 WDR31Q8NA23 367 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 SMYD1Q8NB12 490 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 C11orf65Q8NCR3 313 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 COX4I2Q96KJ9 171 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 PIF1Q9H611 641 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 C12orf10Q9HB07 376 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 SLC13A4Q9UKG4 626 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 RASD1Q9Y272 281 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 CADP27708 2225 aa17.68■□□□□ 0.42
CTTN-205ENST00000415461 NIPBLQ6KC79 2804 aaeCLIP17.67■□□□□ 0.424e-7■■■■□ 20.6
CTTN-205ENST00000415461 TMCC2O75069 709 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 MFN2O95140 757 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 VAMP5O95183 116 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 OPN1SWP03999 348 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 PTNP21246 168 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 MPGP29372 298 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 CDKN1AP38936 164 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 SF3A3Q12874 501 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■□□□ 13.2
CTTN-205ENST00000415461 TMEM108Q6UXF1 575 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 Q71RC1 249 aaPredicted RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 POMGNT2Q8NAT1 580 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 C1orf162Q8NEQ5 155 aaPredicted RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 RNF217Q8TC41 542 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 TSPEARQ8WU66 669 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 DNAJA4Q8WW22 397 aaPredicted RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 ALKBH3Q96Q83 286 aaPredicted RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 C1QTNF6Q9BXI9 259 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 FGFR1OP2Q9NVK5 253 aa17.67■□□□□ 0.42
CTTN-205ENST00000415461 CISD1Q9NZ45 108 aaKnown RBP17.67■□□□□ 0.42
CTTN-205ENST00000415461 A0A0B4J2E0 115 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 A0A1B0GX12 115 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 M0R082 166 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 M0R1B8 84 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 M0R3H8 397 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 TPST2O60704 377 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 FZD7O75084 574 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 CDH2P19022 906 aaPredicted RBP17.66■□□□□ 0.42
CTTN-205ENST00000415461 CD40P25942 277 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 TGFBR3Q03167 851 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 OR1Q1Q15612 314 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 METTL21CQ5VZV1 264 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 CGB2Q6NT52 195 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 NIPAL3Q6P499 406 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 KLHL17Q6TDP4 642 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 C17orf78Q8N4C9 275 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 BHLHE22Q8NFJ8 381 aaPredicted RBP17.66■□□□□ 0.42
CTTN-205ENST00000415461 ZNF417Q8TAU3 575 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 SLC38A4Q969I6 547 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 TAAR8Q969N4 342 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 ZNF587Q96SQ5 575 aaPredicted RBP17.66■□□□□ 0.42
CTTN-205ENST00000415461 KAT8Q9H7Z6 458 aaKnown RBP17.66■□□□□ 0.42
CTTN-205ENST00000415461 SLC17A5Q9NRA2 495 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 KLHL14Q9P2G3 628 aa17.66■□□□□ 0.42
CTTN-205ENST00000415461 OVOL3O00110 214 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 FBP2O00757 339 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 SMAD7O15105 426 aaKnown RBP17.65■□□□□ 0.42
CTTN-205ENST00000415461 KRT33AO76009 404 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 TROVE2P10155 538 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTTN-205ENST00000415461 PTAFRP25105 342 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 GRPRP30550 384 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 RBBP4Q09028 425 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 HIKESHIQ53FT3 197 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 FAM69AQ5T7M9 428 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 FAM91A1Q658Y4 838 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 ULK3Q6PHR2 472 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 C5orf46Q6UWT4 87 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 LINGO2Q7L985 606 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 NET1Q7Z628 596 aaPredicted RBP17.65■□□□□ 0.42
CTTN-205ENST00000415461 GTPBP3Q969Y2 492 aaKnown RBP17.65■□□□□ 0.42
CTTN-205ENST00000415461 TMEM27Q9HBJ8 222 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 B3GAT1Q9P2W7 334 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 AMDHD2Q9Y303 409 aa17.65■□□□□ 0.42
CTTN-205ENST00000415461 TRAV36DV7A0A075B6V5 113 aa17.64■□□□□ 0.41
CTTN-205ENST00000415461 ZNF587BE7ETH6 402 aa17.64■□□□□ 0.41
CTTN-205ENST00000415461 AIM2O14862 343 aa17.64■□□□□ 0.41
CTTN-205ENST00000415461 OR2T1O43869 369 aa17.64■□□□□ 0.41
CTTN-205ENST00000415461 UPK3AO75631 287 aa17.64■□□□□ 0.41
CTTN-205ENST00000415461 CD8AP01732 235 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms