RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CT45A9P0DMV2 189 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 TALDO1P37837 337 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ACTR1BP42025 376 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 DIO1P49895 249 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ACTR1AP61163 376 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ERV3-1Q14264 604 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 CT45A2Q5DJT8 189 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 TMEM65Q6PI78 240 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 DNM1P46Q6ZS02 220 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 OVCH1Q7RTY7 1134 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 FAM122BQ7Z309 247 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 KANSL1Q7Z3B3 1105 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 SLITRK4Q8IW52 837 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 SYS1Q8N2H4 156 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 DNAAF1Q8NEP3 725 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 CEP76Q8TAP6 659 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 MSANTD3Q96H12 275 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 Q96M85 177 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 GABRG3Q99928 467 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 DHRS9Q9BPW9 319 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 RTN4RQ9BZR6 473 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 GDE1Q9NZC3 331 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 GLTPQ9NZD2 209 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 ABRACLQ9P1F3 81 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 FOXJ3Q9UPW0 622 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 PRELID1Q9Y255 219 aa9.02□□□□□ -0.97
SS18-203ENST00000415083 TRBV2A0A0J9YWF9 115 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 GPANK1O95872 356 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ANXA3P12429 323 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 GDI1P31150 447 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 PGDP52209 483 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 AP2S1P53680 142 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 KIAA1024LP59773 190 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 KCNAB1Q14722 419 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 NFATC4Q14934 902 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 BICRALQ6AI39 1079 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 PWWP2BQ6NUJ5 590 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 RPL13AP3Q6NVV1 102 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 FCRLAQ7L513 359 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 UBE2Q1Q7Z7E8 422 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 OR9A4Q8NGU2 314 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 OR2T27Q8NH04 317 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ELSPBP1Q96BH3 223 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 LCORQ96JN0 433 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 ZFYVE21Q9BQ24 234 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 REG4Q9BYZ8 158 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 SEMA4CQ9C0C4 833 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 METTL17Q9H7H0 456 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 NKIRAS2Q9NYR9 191 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 TMEM184BQ9Y519 407 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 HEBP2Q9Y5Z4 205 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 IFITM5A6NNB3 132 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 FLRT2O43155 660 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 APODP05090 189 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 DCTDP32321 178 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ADH7P40394 386 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 TAS2R43P59537 309 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ERVK-25P63136 954 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 EGR4Q05215 589 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 FAM198BQ6UWH4 519 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 NHLRC1Q6VVB1 395 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 LRRTM1Q86UE6 522 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 BPHLQ86WA6 291 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 MS4A15Q8N5U1 240 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ZNF511Q8NB15 262 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 OR51A4Q8NGJ6 313 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 LRRC20Q8TCA0 184 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 MOGAT1Q96PD6 335 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 NKX3-1Q99801 234 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 KHNYNO15037 678 aaKnown RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 DHFRP00374 187 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 EGFP01133 1207 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 CD1AP06126 327 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 NUDT1P36639 197 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 RPS27P42677 84 aaKnown RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 BTG2P78543 158 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 SNTB2Q13425 540 aaKnown RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 DYRK1AQ13627 763 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 UBE2NLQ5JXB2 153 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 HACD4Q5VWC8 232 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 APOOLQ6UXV4 268 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 ZNF614Q8N883 585 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 PIGKQ92643 395 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 CNN2Q99439 309 aaKnown RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 OR10A4Q9H209 315 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 KCNK15Q9H427 330 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 RANBP3Q9H6Z4 567 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 KRCC1Q9NPI7 259 aaPredicted RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
SS18-203ENST00000415083 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
SS18-203ENST00000415083 TRAV8-7A0A075B6U6 113 aa9□□□□□ -0.97
SS18-203ENST00000415083 ZNF749O43361 778 aa9□□□□□ -0.97
SS18-203ENST00000415083 HOXC4P09017 264 aaPredicted RBP9□□□□□ -0.97
SS18-203ENST00000415083 TYRP1P17643 537 aa9□□□□□ -0.97
SS18-203ENST00000415083 EDNRAP25101 427 aa9□□□□□ -0.97
SS18-203ENST00000415083 RBM34P42696 430 aaKnown RBP9□□□□□ -0.97
SS18-203ENST00000415083 EFNA3P52797 238 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms