RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 YWHABP31946 246 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 NDST1P52848 882 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PLA2G16P53816 162 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC10A2Q12908 348 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 GNA13Q14344 377 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 NFATC4Q14934 902 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PDGFRLQ15198 375 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 LPAL2Q16609 132 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SPANXN4Q5MJ08 99 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DMKNQ6E0U4 476 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 TCEAL6Q6IPX3 200 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TMIGD1Q6UXZ0 262 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DPY19L2P2Q6ZN68 376 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 LUZP2Q86TE4 346 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 COMTD1Q86VU5 262 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ERI1Q8IV48 349 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 GPR137CQ8N3F9 429 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RFESDQ8TAC1 157 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZNF596Q8TC21 504 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC22A8Q8TCC7 542 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 APOBEC4Q8WW27 367 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 FGF11Q92914 225 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ART4Q93070 314 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TCEAL3Q969E4 200 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC35B4Q969S0 331 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 UPRTQ96BW1 309 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 COPS8Q99627 209 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 IL12RB2Q99665 862 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RBM4BQ9BQ04 359 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 CHRDL1Q9BU40 450 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TRIM62Q9BVG3 475 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TIPINQ9BVW5 301 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RBM4Q9BWF3 364 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 HAUS4Q9H6D7 363 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SUDS3Q9H7L9 328 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZNHIT6Q9NWK9 470 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 GPR83Q9NYM4 423 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 WRAP73Q9P2S5 460 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 VANGL2Q9ULK5 521 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RNF24Q9Y225 148 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PI4KAP42356 2102 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 A0A1B0GUH1 482 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 GOLGA6L9A6NEM1 432 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CCNE2O96020 404 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OAS1P00973 400 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 GYPCP04921 128 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 S100A9P06702 114 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 RHOXF2BP0C7M4 288 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 IGHV4-31P0DP07 118 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A2P11168 524 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 PROZP22891 400 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CFHR2P36980 270 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 EEF1A1P68104 462 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 TMEM187Q14656 261 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SYCP1Q15431 976 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR1C1Q15619 314 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZCWPW2Q504Y3 356 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CTSL3PQ5NE16 218 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 EEF1A1P5Q5VTE0 462 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SLC8B1Q6J4K2 584 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TTC23LQ6PF05 361 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 SPNS3Q6ZMD2 512 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ITIH5Q86UX2 942 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TMEM17Q86X19 198 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 KIRREL3Q8IZU9 778 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 PELI3Q8N2H9 469 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CIARTQ8N365 385 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR4D6Q8NGJ1 314 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR4A15Q8NGL6 344 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OR6X1Q8NH79 312 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 KCNG3Q8TAE7 436 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 LNX1Q8TBB1 728 aaPredicted RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 MARCH1Q8TCQ1 289 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TCP11Q8WWU5 503 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ZG16BQ96DA0 208 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 OMA1Q96E52 524 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 CEP170P1Q96L14 293 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 ATP6V1G3Q96LB4 118 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 S1PR3Q99500 378 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 LPAR4Q99677 370 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TUBA1CQ9BQE3 449 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 RHOXF2Q9BQY4 288 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 NAT9Q9BTE0 207 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 FGFBP2Q9BYJ0 223 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 DNTTIP1Q9H147 329 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 POLD4Q9HCU8 107 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 FGF21Q9NSA1 209 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 MRPL22Q9NWU5 206 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 DUS2Q9NX74 493 aaKnown RBP2.2□□□□□ -2.06
MCF2-204ENST00000414978 IL37Q9NZH6 218 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 IL36GQ9NZH8 169 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TBC1D24Q9ULP9 559 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 WDR45Q9Y484 360 aa2.2□□□□□ -2.06
MCF2-204ENST00000414978 TRBV5-5A0A0J9YX44 114 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 USP27XA6NNY8 438 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 GOLGA8TH3BQL2 631 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 PPIHO43447 177 aaKnown RBP2.19□□□□□ -2.06
MCF2-204ENST00000414978 ATP5LO75964 103 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 IGHG4P01861 327 aa2.19□□□□□ -2.06
MCF2-204ENST00000414978 ZNF12P17014 697 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms