RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MARC2Q969Z3 335 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 ZNF764Q96H86 408 aaPredicted RBP13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 FOXJ3Q9UPW0 622 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TVP23AA6NH52 213 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 H0Y8X5 98 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 STX11O75558 287 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 HOXD10P28358 340 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 PPP2CBP62714 309 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 PPP2CAP67775 309 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TMEM31Q5JXX7 168 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 NDUFAF7Q7L592 441 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 ESX1Q8N693 406 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 FRMD1Q8N878 549 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 LHFPL5Q8TAF8 219 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 COPZ2Q9P299 210 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 KLHL9Q9P2J3 617 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TBC1D29Q9UFV1 150 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 DUXAA6NLW8 204 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 OGG1O15527 345 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 CEACAM5P06731 702 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 LINC00271P0C7V0 271 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 ALG10BQ5I7T1 473 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TMUB2Q71RG4 321 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 GLB1L2Q8IW92 636 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 CMIPQ8IY22 773 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 RAB42Q8N4Z0 105 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 LCN9Q8WX39 176 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 MOAP1Q96BY2 351 aa13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 CNN2Q99439 309 aaKnown RBP13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 KRCC1Q9NPI7 259 aaPredicted RBP13.37□□□□□ -0.27
SEMA3F-202ENST00000413852 TRAV1-2A0A0B4J238 106 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 ACHEP22303 614 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 HSD17B2P37059 387 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 SEC13P55735 322 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 DYRK1AQ13627 763 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PRAMEF8Q5VWM4 474 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PRAMEF7Q5VXH5 474 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PWWP2BQ6NUJ5 590 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 LRFN4Q6PJG9 635 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TMPRSS11FQ6ZWK6 438 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 ZNF761Q86XN6 746 aaPredicted RBP13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PPP1R14AQ96A00 147 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TRAV8-7A0A075B6U6 113 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TBC1D3KA0A087X1G2 549 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TBC1D3FA6NER0 549 aaPredicted RBP13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PDCD5O14737 125 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 HCRTR1O43613 425 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 ARL6IP5O75915 188 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 CBX7O95931 251 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 IGKV1D-16P01601 117 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 RLN2P04090 185 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TNFRSF17Q02223 184 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 AGBL4Q5VU57 503 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 METTL11BQ5VVY1 283 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 B3GNTL1Q67FW5 361 aaPredicted RBP13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TBC1D3GQ6DHY5 549 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 BIVMQ86UB2 503 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TMPRSS12Q86WS5 348 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 MFSD9Q8NBP5 474 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TMEM138Q9NPI0 162 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 DTX4Q9Y2E6 619 aa13.36□□□□□ -0.27
SEMA3F-202ENST00000413852 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TAS2R43P59537 309 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 SORDQ00796 357 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 PCGF3Q3KNV8 242 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 KIRREL2Q6UWL6 708 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 RNF44Q7L0R7 432 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TTLQ8NG68 377 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 FGF22Q9HCT0 170 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 SRA1Q9HD15 236 aaKnown RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 BLOC1S5-TXNDC5H3BN57 136 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 GSTZ1O43708 216 aaPredicted RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 CREBL2O60519 120 aaPredicted RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TGM6O95932 706 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 LRRC37A5PQ49AS3 106 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 MUC20Q8N307 709 aaPredicted RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 RNF166Q96A37 237 aaPredicted RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 KLHDC3Q9BQ90 382 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 ZMAT3Q9HA38 289 aaKnown RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TMEM27Q9HBJ8 222 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 EXOSC3Q9NQT5 275 aaKnown RBP13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 ACSL5Q9ULC5 683 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 F5P12259 2224 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 HEATR5AQ86XA9 2040 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 OR2M5A3KFT3 312 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 FAM74A7A6NL05 159 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 ZNF879B4DU55 563 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 DCTN6O00399 190 aa13.35□□□□□ -0.27
SEMA3F-202ENST00000413852 TOR1AO14656 332 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms