RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 DMTNQ08495 405 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 KLF10Q13118 480 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 OR1Q1Q15612 314 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 REP15Q6BDI9 236 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 CGB2Q6NT52 195 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 COMTD1Q86VU5 262 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 PCYOX1LQ8NBM8 494 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 RNF217Q8TC41 542 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 SLC26A7Q8TE54 656 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 TMEM171Q8WVE6 324 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 FBXW5Q969U6 566 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 SLC25A36Q96CQ1 311 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 PTDSS2Q9BVG9 487 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 AMBRA1Q9C0C7 1298 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 CXorf56Q9H5V9 222 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 SAR1AQ9NR31 198 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 GID8Q9NWU2 228 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
MCF2L-211ENST00000413354 PLCE1Q9P212 2302 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 TRAV36DV7A0A075B6V5 113 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 A0A0B4J2E0 115 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 A0A1B0GX12 115 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 M0QX08 132 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 PDLIM1O00151 329 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 KRT33AO76009 404 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 LGI1O95970 557 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 PLAUP00749 431 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ITGA5P08648 1049 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 MPGP29372 298 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 MDH1P40925 334 aaKnown RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 BSPH1Q075Z2 132 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 NRF1Q16656 503 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 NANOGP8Q6NSW7 305 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ZNF613Q6PF04 617 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 SEZ6L2Q6UXD5 910 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ZIC4Q8N9L1 334 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 SMYD1Q8NB12 490 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ADPRHL1Q8NDY3 354 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 OR6S1Q8NH40 331 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 LRRC58Q96CX6 371 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 KTI12Q96EK9 354 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 MUS81Q96NY9 551 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ZNF385AQ96PM9 386 aaKnown RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ARHGDIGQ99819 225 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 ECSITQ9BQ95 431 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 RSPO3Q9BXY4 272 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 NANOGQ9H9S0 305 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 SLC7A10Q9NS82 523 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 MGAT4BQ9UQ53 548 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 B3GALT5Q9Y2C3 310 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 CORINQ9Y5Q5 1042 aa13.82□□□□□ -0.2
MCF2L-211ENST00000413354 MAGED1Q9Y5V3 778 aaPredicted RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 FLNAP21333 2647 aaKnown RBP13.82□□□□□ -0.2
MCF2L-211ENST00000413354 USF3Q68DE3 2245 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 A0A087WUJ7 227 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 ZNF587BE7ETH6 402 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 M0R3H8 397 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 AKAP8O43823 692 aaKnown RBP13.81□□□□□ -0.2
MCF2L-211ENST00000413354 OPN1SWP03999 348 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 ZNF43P17038 809 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.25e-9■■■■■ 39.6
MCF2L-211ENST00000413354 GABRA6Q16445 453 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 VMACQ2NL98 169 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 Q5PR19 223 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 ERICH5Q6P6B1 374 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 KLHL24Q6TFL4 600 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 PRSS57Q6UWY2 283 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 TMEM108Q6UXF1 575 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 CREB3L2Q70SY1 520 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 SNX32Q86XE0 403 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 OR52N5Q8NH56 324 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 RADILQ96JH8 1075 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 OXGR1Q96P68 337 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 MCHR1Q99705 422 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 TMEM43Q9BTV4 400 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 GSX2Q9BZM3 304 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 RCE1Q9Y256 329 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 AMDHD2Q9Y303 409 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 SLC25A15Q9Y619 301 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 C2CD3Q4AC94 2353 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 ACANP16112 2415 aa13.81□□□□□ -0.2
MCF2L-211ENST00000413354 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
MCF2L-211ENST00000413354 MTORP42345 2549 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 DPRXA6NFQ7 191 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 M0R082 166 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 FXYD1O00168 92 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 CHP2O43745 196 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 FOSL1P15407 271 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 RPS4XP62701 263 aaKnown RBP13.8□□□□□ -0.2
MCF2L-211ENST00000413354 C1DQ13901 141 aaKnown RBP13.8□□□□□ -0.2
MCF2L-211ENST00000413354 DUSP7Q16829 419 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 ZNF672Q499Z4 452 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-211ENST00000413354 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-211ENST00000413354 CCDC80Q76M96 950 aa13.8□□□□□ -0.2
MCF2L-211ENST00000413354 LSRQ86X29 649 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-211ENST00000413354 SCAIQ8N9R8 606 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms