RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GUSBP08236 651 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 FGF2P09038 288 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 IL32P24001 234 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 FAUP35544 74 aaKnown RBP16.17■□□□□ 0.18
SDCBP-202ENST00000413219 PRMT2P55345 433 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
SDCBP-202ENST00000413219 BTN1A1Q13410 526 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 ISXQ2M1V0 245 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 DEFB134Q4QY38 66 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 ALG10BQ5I7T1 473 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 SLC6A19Q695T7 634 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 HSD17B13Q7Z5P4 300 aaPredicted RBP16.17■□□□□ 0.18
SDCBP-202ENST00000413219 SERPINA12Q8IW75 414 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 EIF4E3Q8N5X7 224 aaKnown RBP16.17■□□□□ 0.18
SDCBP-202ENST00000413219 SLITRK2Q9H156 845 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 IL21RQ9HBE5 538 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 MED11Q9P086 117 aa16.17■□□□□ 0.18
SDCBP-202ENST00000413219 OTOL1A6NHN0 477 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-202ENST00000413219 CTNSO60931 367 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 GABRA1P14867 456 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 CDK2P24941 298 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 MAPK3P27361 379 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-202ENST00000413219 DCTDP32321 178 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 VIPR2P41587 438 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 ACAA2P42765 397 aaKnown RBP16.16■□□□□ 0.18
SDCBP-202ENST00000413219 SCAND1P57086 179 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 TAS2R20P59543 309 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 CBFBQ13951 182 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 FGL2Q14314 439 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 DPY19L2P2Q6ZN68 376 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 OR51L1Q8NGJ5 315 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 LCN9Q8WX39 176 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 RGP1Q92546 391 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-202ENST00000413219 HSPA12BQ96MM6 686 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 NMNAT2Q9BZQ4 307 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 B3GNT4Q9C0J1 378 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 LDAHQ9H6V9 325 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 ZC4H2Q9NQZ6 224 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 OPN4Q9UHM6 478 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 TRPM6Q9BX84 2022 aa16.16■□□□□ 0.18
SDCBP-202ENST00000413219 LRRC72A6NJI9 287 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 TOR1AO14656 332 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ARPC3O15145 178 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 NKX2-2O95096 273 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 PAK4O96013 591 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 EPCAMP16422 314 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SPI1P17947 270 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 GABRA3P34903 492 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ZNF273Q14593 569 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 RBMS2Q15434 407 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ZNF684Q5T5D7 378 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 FBXO42Q6P3S6 717 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 LRRN1Q6UXK5 716 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SLC36A1Q7Z2H8 476 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 NPEPL1Q8NDH3 523 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ZCCHC10Q8TBK6 192 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ASB13Q8WXK3 278 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 RIT1Q92963 219 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SLC22A18Q96BI1 424 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SGTBQ96EQ0 304 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 RBM18Q96H35 190 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 C1QTNF6Q9BXI9 259 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 CCDC86Q9H6F5 360 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SNRNP200O75643 2136 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SLC22A23A1A5C7 686 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 MCIDASD6RGH6 385 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ATP6V1G2-DDX39BF2Z307 99 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SELENOFO60613 162 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 AQP8O94778 261 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 GLSO94925 669 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 WDPCPO95876 746 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 LPLP06858 475 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 POU3F2P20265 443 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 GK2Q14410 553 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 CST6Q15828 149 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 PRICKLE4Q2TBC4 344 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 SFRP5Q5T4F7 317 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 DND1Q8IYX4 353 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 OR4E2Q8NGC2 313 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 COQ8AQ8NI60 647 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 HOXB13Q92826 284 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 ORAI1Q96D31 301 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 PTCHD1Q96NR3 888 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 OR2A5Q96R48 311 aa16.15■□□□□ 0.18
SDCBP-202ENST00000413219 TTYH1Q9H313 450 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 DNAJB12Q9NXW2 375 aaKnown RBP16.15■□□□□ 0.18
SDCBP-202ENST00000413219 P2RX6O15547 441 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ZFPL1O95159 310 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 GPR75O95800 540 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 CLDN12P56749 244 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 NANOS3P60323 173 aaKnown RBP16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ID2Q02363 134 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 MGAT2Q10469 447 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 MPPED2Q15777 294 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 NDUFAF6Q330K2 333 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 C1orf53Q5VUE5 145 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 ULK3Q6PHR2 472 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 NHLRC1Q6VVB1 395 aa16.14■□□□□ 0.17
SDCBP-202ENST00000413219 STAC2Q6ZMT1 411 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms