RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ZNF426Q9BUY5 554 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 P2RY12Q9H244 342 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 RNF146Q9NTX7 359 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MAFBQ9Y5Q3 323 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ELOA3CA0A087WX78 387 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 TAAR5O14804 337 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 SPINT2O43291 252 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 B4GALT4O60513 344 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 FCGR3BO75015 233 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 HPP00738 406 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CD40P25942 277 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MVDP53602 400 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 KIAA1024LP59773 190 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 C1QTNF8P60827 252 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 RAP1BP61224 184 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MADCAM1Q13477 382 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CTU2Q2VPK5 515 aaKnown RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 BHLHA15Q7RTS1 189 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 LRRC18Q8N456 261 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 GPR26Q8NDV2 337 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ADAMTS18Q8TE60 1221 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 RNF133Q8WVZ7 376 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 RGMAQ96B86 450 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ZG16BQ96DA0 208 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ZPBPQ9BS86 351 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 THAP7Q9BT49 309 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 LY9Q9HBG7 655 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 TRAV21A0A0B4J279 112 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 FAM170BA6NMN3 283 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 FMO6PO60774 539 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 NEURL1O76050 574 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CDS2O95674 445 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 FAM157CP0CG43 387 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MGAT1P26572 445 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 PTBP1P26599 531 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MICAQ29983 383 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 PLPPR5Q32ZL2 321 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MSS51Q4VC12 460 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ENTPD8Q5MY95 495 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 RNASEKQ6P5S7 137 aaKnown RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MOXD1Q6UVY6 613 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 TBC1D26Q86UD7 250 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 AMZ2Q86W34 360 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 PLPP6Q8IY26 295 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 GPRC5AQ8NFJ5 357 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 SLC26A10Q8NG04 563 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 OR4K13Q8NH42 304 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 STON2Q8WXE9 905 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ZNF835Q9Y2P0 537 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MYPNQ86TC9 1320 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 SLC22A31A6NKX4 558 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 GPR171O14626 319 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 OR1F1O43749 312 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 PSMB4P28070 264 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ACAA2P42765 397 aaKnown RBP4.3□□□□□ -1.72
PTPN13-202ENST00000411767 DIO1P49895 249 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 ASPGQ86U10 573 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MOGAT3Q86VF5 341 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CALHM1Q8IU99 346 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 OR10AD1Q8NGE0 317 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 UBA3Q8TBC4 463 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CANT1Q8WVQ1 401 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MED30Q96HR3 178 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 CAPNS2Q96L46 248 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 BCL7BQ9BQE9 202 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 B3GNT5Q9BYG0 378 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 MAF1Q9H063 256 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 LHX6Q9UPM6 363 aa4.3□□□□□ -1.72
PTPN13-202ENST00000411767 KBTBD11-OT1A0A1B0GTJ5 212 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 YJEFN3A6XGL0 299 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM262E9PQX1 116 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RNASET2O00584 256 aaKnown RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MPDU1O75352 247 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RAF1P04049 648 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PRNPP04156 253 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NAT2P11245 290 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KIR3DL2P43630 455 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CPSF6Q16630 551 aaKnown RBP eCLIP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NANOGP8Q6NSW7 305 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MFSD12Q6NUT3 480 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FAM117BQ6P1L5 589 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OLIG3Q7RTU3 272 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PRR18Q8N4B5 295 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 SENP5Q96HI0 755 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 ACPTQ9BZG2 426 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 CD244Q9BZW8 370 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 FTSJ1Q9UET6 329 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MUTYHQ9UIF7 546 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 RAXQ9Y2V3 346 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-202ENST00000411767 NRCAMQ92823 1304 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 KIAA0586Q9BVV6 1533 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 TGIF2-C20orf24A0A0A6YYL0 155 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 H2AFB1P0C5Y9 115 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 PIGAP37287 484 aa4.29□□□□□ -1.72
PTPN13-202ENST00000411767 MTCP1P56278 107 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms