RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 DUSP13Q9UII6 198 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF346Q9UL40 294 aaKnown RBP5.36□□□□□ -1.55
LINC00396-201ENST00000411690 NFU1Q9UMS0 254 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 CHMP2BQ9UQN3 213 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 PCDHGB5Q9Y5G0 923 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 TNPO3Q9Y5L0 923 aaKnown RBP5.36□□□□□ -1.55
LINC00396-201ENST00000411690 INSIG2Q9Y5U4 225 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 ARHGAP32A7KAX9 2087 aa5.36□□□□□ -1.55
LINC00396-201ENST00000411690 A0A096LPK6 155 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 A0A1W2PPW3 197 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF587BE7ETH6 402 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 H0YL77 283 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TRAPPC2LH3BP13 241 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 K7EIL1 84 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 OR7A17O14581 309 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TPD52L2O43399 206 aaKnown RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 DNPH1O43598 174 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TRAF3IP2O43734 574 aaPredicted RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 PCDH7O60245 1069 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TRIM13O60858 407 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 PLATP00750 562 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 PDYNP01213 254 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 NTSP30990 170 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 GLRXP35754 106 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 ARR3P36575 388 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 MAP3K8P41279 467 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 SERPINB4P48594 390 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 PRKAG1P54619 331 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 OR2B6P58173 313 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 MERTKQ12866 999 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 CBFBQ13951 182 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 FRG1Q14331 258 aaKnown RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 NDUFAF6Q330K2 333 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 ALKBH6Q3KRA9 238 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 NRN1LQ496H8 165 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 CCNJQ5T5M9 372 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 STEAP4Q687X5 459 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM154Q6P9G4 183 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 Q6YL49 198 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 AAED1Q7RTV5 226 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM86BQ8N661 226 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TMCO5AQ8N6Q1 288 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 CDRT4Q8N9R6 151 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 C16orf78Q8WTQ4 265 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 DYRK2Q92630 601 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 HOXB13Q92826 284 aaPredicted RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM45BQ96B21 275 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 VPS11Q9H270 941 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 BRF2Q9HAW0 419 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 NOX4Q9NPH5 578 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 GAR1Q9NY12 217 aaKnown RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 MYEF2Q9P2K5 600 aaKnown RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 VPS29Q9UBQ0 182 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 RNF14Q9UBS8 474 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 GRID1Q9ULK0 1009 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 FZR1Q9UM11 496 aa5.35□□□□□ -1.55
LINC00396-201ENST00000411690 SPIN1Q9Y657 262 aaPredicted RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TET2Q6N021 2002 aaPredicted RBP5.35□□□□□ -1.55
LINC00396-201ENST00000411690 TRAV40A0A0B4J280 105 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 C17orf100A8MU93 164 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 H3BS24 57 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF264O43296 627 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 EIF1BO60739 113 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 PIAS1O75925 651 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 HSPA4LO95757 839 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 IGHMP01871 453 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SFTPBP07988 381 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ACP2P11117 423 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 DDCP20711 480 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ATP6V1C1P21283 382 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 CXCR5P32302 372 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SESN3P58005 492 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 RAE1P78406 368 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 POU6F2P78424 691 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 H3F3AP84243 136 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 DLG1Q12959 904 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SLC17A1Q14916 467 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ZKSCAN8Q15776 578 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 DUSP5Q16690 384 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 PRSS53Q2L4Q9 553 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 PCGF3Q3KNV8 242 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 KLHL26Q53HC5 615 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 RPS26P11Q5JNZ5 115 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 GKAP1Q5VSY0 366 aaPredicted RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 METTL2BQ6P1Q9 378 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 CCDC137Q6PK04 289 aaKnown RBP5.34□□□□□ -1.55
LINC00396-201ENST00000411690 PAQR6Q6TCH4 344 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 Q6ZTK2 550 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 USP51Q70EK9 711 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 SZRD1Q7Z422 152 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ZBED8Q8IZ13 594 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 PDIK1LQ8N165 341 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF614Q8N883 585 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 COX18Q8N8Q8 333 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 OR4F6Q8NGB9 312 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM234Q8WY98 164 aa5.34□□□□□ -1.55
LINC00396-201ENST00000411690 ST8SIA1Q92185 356 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms