RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FCGR1BQ92637 280 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 AKAP1Q92667 903 aaKnown RBP eCLIP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 DPF1Q92782 380 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM159Q96B96 161 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PPWD1Q96BP3 646 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CMTM5Q96DZ9 223 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 SGTBQ96EQ0 304 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CERS2Q96G23 380 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CCDC120Q96HB5 630 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 THOC3Q96J01 351 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 C9orf72Q96LT7 481 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 MS4A10Q96PG2 267 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 NEU1Q99519 415 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GPR21Q99679 349 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF559Q9BR84 538 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TSSK1BQ9BXA7 367 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 ALX4Q9H161 411 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 OR51M1Q9H341 326 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 TMEM231Q9H6L2 316 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CHMP1AQ9HD42 196 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GSN-AS1Q9NRJ2 163 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 POT1Q9NUX5 634 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 FAM120CQ9NX05 1096 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 CNOT2Q9NZN8 540 aaKnown RBP4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PISDQ9UG56 409 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 GPR160Q9UJ42 338 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 KLHL21Q9UJP4 597 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 PLA2G2DQ9UNK4 145 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 LOXL2Q9Y4K0 774 aa4.17□□□□□ -1.74
SF3B1-202ENST00000409915 KIF26BQ2KJY2 2108 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MAP1BP46821 2468 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 APC2O95996 2303 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZFHX4Q86UP3 3567 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TCRBV9S1A1TA0A576 114 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZNF729A6NN14 1252 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 EFCAB7A8K855 629 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 E5RI56 91 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 BTN3A3O00478 584 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TLX3O43711 291 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PRAMEF10O60809 474 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 RAD51DO75771 328 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CDC123O75794 336 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SLC22A5O76082 557 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 KDM4BO94953 1096 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SOX30O94993 753 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CCNB2O95067 398 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 GABARAPO95166 117 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CSTAP01040 98 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 IFNGP01579 166 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 C1QBP02746 253 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 S100A8P05109 93 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 GLAP06280 429 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 RRASP10301 218 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SPP1P10451 314 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CCL4P13236 92 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PVRP15151 417 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 AMD1P17707 334 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 HLA-DMAP28067 261 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CCKBRP32239 447 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SERPINB10P48595 397 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 RIDAP52758 137 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CDKN2DP55273 166 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 RAE1P78406 368 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MRPS34P82930 218 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 HSF2Q03933 536 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PRKCDQ05655 676 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZFP36L1Q07352 338 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 RGS1Q08116 209 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 COTL1Q14019 142 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TMED2Q15363 201 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TAB1Q15750 504 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MICAQ29983 383 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PLEKHN1Q494U1 663 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CCSMST1Q4G0I0 132 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 C6orf141Q5SZD1 244 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TEDDM1Q5T9Z0 273 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 C3orf33Q6P1S2 294 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ERICH5Q6P6B1 374 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ANKRD16Q6P6B7 361 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 B3GLCTQ6Y288 498 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 PIWIL4Q7Z3Z4 852 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 HAPLN4Q86UW8 402 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 HIPK1Q86Z02 1210 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CTAGE3PQ8IX95 158 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 KLHDC8AQ8IYD2 350 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SLC22A15Q8IZD6 547 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 C2orf73Q8N5S3 287 aaPredicted RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZBTB2Q8N680 514 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SLC37A3Q8NCC5 494 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ADPRHL1Q8NDY3 354 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 FAM71CQ8NEG0 241 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 TRPV3Q8NET8 790 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 OR4E2Q8NGC2 313 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 OR4D9Q8NGE8 314 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 CD200R1Q8TD46 325 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZFP90Q8TF47 636 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 MZB1Q8WU39 189 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 LCN9Q8WX39 176 aa4.16□□□□□ -1.74
SF3B1-202ENST00000409915 ZCCHC14Q8WYQ9 949 aaKnown RBP4.16□□□□□ -1.74
SF3B1-202ENST00000409915 SLC7A6Q92536 515 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms