RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TRBC2A0A5B9 178 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR6C74A6NCV1 312 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 TRPC5OSA6NMA1 111 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 FOXE1O00358 373 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 NDUFAB1O14561 156 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 LSM1O15116 133 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 CASC3O15234 703 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 FLRT2O43155 660 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ARHGEF9O43307 516 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 B4GAT1O43505 415 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 LCMT2O60294 686 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 ETHE1O95571 254 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 PDYNP01213 254 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 KRT6AP02538 564 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 KRT6BP04259 564 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 PROS1P07225 676 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 SERPINA6P08185 405 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ALPPL2P10696 532 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 GP1BBP13224 206 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CD59P13987 128 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 MAGP20916 626 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 DNASE1P24855 282 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CD1CP29017 333 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CMPK1P30085 196 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 HMOX2P30519 316 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 KRT6CP48668 564 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CCR8P51685 355 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 TSTA3Q13630 321 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 ABRAXAS2Q15018 415 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 SF3A2Q15428 464 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 ZIC1Q15915 447 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CLPPQ16740 277 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 SMU1Q2TAY7 513 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ADPRMQ3LIE5 342 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 PAGE2BQ5JRK9 111 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 C6orf136Q5SQH8 315 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 FAM91A1Q658Y4 838 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 MED27Q6P2C8 311 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 GUSBP11Q6P575 273 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 SPESP1Q6UW49 350 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 TMIGD1Q6UXZ0 262 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 RBPMS2Q6ZRY4 209 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 VN1R4Q7Z5H5 301 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 GTSCR1Q86UQ5 136 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 RNF175Q8N4F7 328 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 EID2Q8N6I1 236 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 MFSD9Q8NBP5 474 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CCDC197Q8NCU1 140 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ZNF740Q8NDX6 193 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR7G3Q8NG95 312 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR6C4Q8NGE1 309 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR5AP2Q8NGF4 316 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR10G6Q8NH81 332 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 SELENOMQ8WWX9 145 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 UBE2E3Q969T4 207 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ATP6V1E2Q96A05 226 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 TM4SF19Q96DZ7 209 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 PRAP1Q96NZ9 151 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR2A5Q96R48 311 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 OR52B2Q96RD2 323 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CCT7Q99832 543 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 AIF1LQ9BQI0 150 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 DPH7Q9BTV6 452 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ACAT2Q9BWD1 397 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 GTPBP2Q9BX10 602 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 ZNF717Q9BY31 904 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 ACPTQ9BZG2 426 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 AICDAQ9GZX7 198 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CHRNA10Q9GZZ6 450 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 WDR55Q9H6Y2 383 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 FARSBQ9NSD9 589 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 HRASLS2Q9NWW9 162 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 NKIRAS2Q9NYR9 191 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 DAPK2Q9UIK4 370 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 SNX6Q9UNH7 406 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 BTRCQ9Y297 605 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 PADI2Q9Y2J8 665 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 ARL2BPQ9Y2Y0 163 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 FIS1Q9Y3D6 152 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CNOT1A5YKK6 2376 aaKnown RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 GVINP1Q7Z2Y8 2422 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 CCDC88CQ9P219 2028 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 LAMA1P25391 3075 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 PTPRBP23467 1997 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 NUP210LQ5VU65 1888 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 GOLGA8QA0A0J9YX86 632 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 ATP6AP2A0A1C7CYW4 349 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 GSAPA4D1B5 854 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 GOLGA8OA6NCC3 632 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 TLCD2A6NGC4 264 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 C4orf51C9J302 202 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 E9PBE3 544 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 GOLGA8NF8WBI6 632 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 H3BMH7 237 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 SLC28A1O00337 649 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 HAT1O14929 419 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 TOX3O15405 576 aaPredicted RBP3.69□□□□□ -1.82
CLK1-203ENST00000409769 HCRTR1O43613 425 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 DUX1O43812 170 aa3.69□□□□□ -1.82
CLK1-203ENST00000409769 KLHL41O60662 606 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms