RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CXXC5Q7LFL8 322 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 LIPHQ8WWY8 451 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 FGF11Q92914 225 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 MYDGFQ969H8 173 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 RASD2Q96D21 266 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 OR5B2Q96R09 309 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 HCAR1Q9BXC0 346 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 COMMD3-BMI1R4GMX3 469 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 A0A087WZY1 265 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ETV2O00321 342 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 EFSO43281 561 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF208O43345 1280 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 RNF13O43567 381 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TLX3O43711 291 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZIC3O60481 467 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 OR6A2O95222 327 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 MT-ATP6P00846 226 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 DBTP11182 482 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF3P17036 446 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 UQCRC1P31930 480 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 IDUAP35475 653 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 EIF1P41567 113 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SLC16A1P53985 500 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CDH11P55287 796 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 DLX5P56178 289 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 MYBPHQ13203 477 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CRMP1Q14194 572 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 KLHL12Q53G59 568 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 MEDAGQ5VYS4 303 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ARHGAP11AQ6P4F7 1023 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SHFQ7M4L6 423 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 YRDCQ86U90 279 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SULF2Q8IWU5 870 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 KDM8Q8N371 416 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 OR5J2Q8NH18 312 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 OR14L1PQ8NHC6 308 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ASPNQ9BXN1 380 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 FN3KQ9H479 309 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF552Q9H707 407 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CCNB1IP1Q9NPC3 277 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CMC2Q9NRP2 79 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TAS2R16Q9NYV7 291 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 H2AFY2Q9P0M6 372 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 BAIAP2Q9UQB8 552 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CNTRLQ7Z7A1 2325 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 TEX13CA0A0J9YWL9 993 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 OR5H15A6NDH6 313 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-204ENST00000409727 PRODHO43272 600 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 OR2T1O43869 369 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 SLC34A2O95436 690 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 GYPBP06028 91 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 CDK1P06493 297 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 ADRA2AP08913 450 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 CLUP10909 449 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 IMPDH2P12268 514 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 GDF1P27539 372 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 GTF2A1P52655 376 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-204ENST00000409727 EMX1Q04741 257 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-204ENST00000409727 SELENBP1Q13228 472 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 ITGADQ13349 1161 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 XAF1Q6GPH4 301 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 C5orf46Q6UWT4 87 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 GTPBP8Q8N3Z3 284 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-204ENST00000409727 LRRC75AQ8NAA5 344 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 OR2M7Q8NG81 312 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 OR9Q1Q8NGQ5 310 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 RNFT2Q96EX2 444 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 Q96M85 177 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 FAM173AQ9BQD7 235 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 OR51V1Q9H2C8 321 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 NRIP3Q9NQ35 241 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 FKBP14Q9NWM8 211 aa11.22□□□□□ -0.61
CHMP3-204ENST00000409727 SPIN1Q9Y657 262 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-204ENST00000409727 AKAP13Q12802 2813 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 OR2M5A3KFT3 312 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 EFCAB10A6NFE3 127 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 FTCDNL1E5RQL4 147 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 PRR23D1E9PI22 279 aaPredicted RBP11.21□□□□□ -0.61
CHMP3-204ENST00000409727 IMPA2O14732 288 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 AKR7A3O95154 331 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 IFNGP01579 166 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 CD14P08571 375 aa11.21□□□□□ -0.61
CHMP3-204ENST00000409727 PRR23D2P0DMB1 279 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms