RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 HCCSP53701 268 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 ZFP36L1Q07352 338 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 GGTLC2Q14390 218 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 COL28A1Q2UY09 1125 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 SLC35D3Q5M8T2 416 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 BMPERQ8N8U9 685 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 LSM14AQ8ND56 463 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 DCLRE1CQ96SD1 692 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 RXFP3Q9NSD7 469 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 FAIMQ9NVQ4 179 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 TMED7Q9Y3B3 224 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 NOX1Q9Y5S8 564 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 SIRT4Q9Y6E7 314 aaPredicted RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 SMIM30A4D0T7 59 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 CASKO14936 926 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 UPK1BO75841 260 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 ZFAND5O76080 213 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 LDOC1O95751 146 aaPredicted RBP18.8■□□□□ 0.6
USP39-203ENST00000409470 KLK3P07288 261 aaPredicted RBP18.8■□□□□ 0.6
USP39-203ENST00000409470 SDHAP31040 664 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 CDKN2AP42771 156 aaKnown RBP18.8■□□□□ 0.6
USP39-203ENST00000409470 OR12D2P58182 307 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 OR5M10Q6IEU7 315 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 FAM199XQ6PEV8 388 aaPredicted RBP18.8■□□□□ 0.6
USP39-203ENST00000409470 FAM122BQ7Z309 247 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 GRINAQ7Z429 371 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 CCDC190Q86UF4 302 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 OR8K3Q8NH51 312 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 NMNAT2Q9BZQ4 307 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 GRHPRQ9UBQ7 328 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 PCDHGB7Q9Y5F8 929 aa18.8■□□□□ 0.6
USP39-203ENST00000409470 IQCMA0A1B0GVH7 501 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 C2orf72A6NCS6 295 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TBX1O43435 398 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 WISP1O95388 367 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TFP02787 698 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 BGLAPP02818 100 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 OR2T7P0C7T2 308 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 ETV6P41212 452 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TAS2R43P59537 309 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 INSL4Q14641 139 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 FAM69BQ5VUD6 431 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 C1QL3Q5VWW1 255 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TCEAL6Q6IPX3 200 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 ARL9Q6T311 187 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 VASH1Q7L8A9 365 aaPredicted RBP18.79■□□□□ 0.6
USP39-203ENST00000409470 SSX6Q7RTT6 188 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 SLC35F2Q8IXU6 374 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 OR2T27Q8NH04 317 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 ZNRF4Q8WWF5 429 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 MR1Q95460 341 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TCEAL3Q969E4 200 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 SLC25A36Q96CQ1 311 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 SLC30A2Q9BRI3 323 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 MROQ9BYG7 248 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TTTY10Q9BZA0 68 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 RPRD1BQ9NQG5 326 aaKnown RBP18.79■□□□□ 0.6
USP39-203ENST00000409470 NXT1Q9UKK6 140 aaKnown RBP18.79■□□□□ 0.6
USP39-203ENST00000409470 ZMIZ1Q9ULJ6 1067 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TMEM200CA6NKL6 621 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 E9PI62 339 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 RGS9O75916 674 aaPredicted RBP18.79■□□□□ 0.6
USP39-203ENST00000409470 TNFSF8P32971 234 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 CAPZA2P47755 286 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 C17orf67Q0P5P2 114 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 NEIL3Q8TAT5 605 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 ARRDC1-AS1Q9H2J1 176 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 WDR54Q9H977 334 aa18.79■□□□□ 0.6
USP39-203ENST00000409470 TMEM72A0PK05 275 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 C4orf47A7E2U8 309 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 CBFA2T3O75081 653 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 CYC1P08574 325 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 SP9P0CG40 484 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 MPLP40238 635 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PSMD7P51665 324 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 MC2RQ01718 297 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 IL10RAQ13651 578 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ZNF181Q2M3W8 571 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 MAMDC2Q7Z304 686 aaPredicted RBP18.78■□□□□ 0.6
USP39-203ENST00000409470 ADGRG3Q86Y34 549 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 RFLNBQ8N5W9 214 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 TMEM234Q8WY98 164 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 HGDQ93099 445 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PMEPA1Q969W9 287 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PLEKHB1Q9UF11 243 aaPredicted RBP18.78■□□□□ 0.6
USP39-203ENST00000409470 POLHQ9Y253 713 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 CMAHPQ9Y471 501 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ADAM10O14672 748 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 SELENOFO60613 162 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 GLCEO94923 617 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 NAGAP17050 411 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 GALP22466 123 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 PYCR1P32322 319 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ACTA2P62736 377 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ACTG2P63267 376 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 SLC3A1Q07837 685 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 OXA1LQ15070 435 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.78■□□□□ 0.66e-7■□□□□ 9.1
USP39-203ENST00000409470 TP53I3Q53FA7 332 aa18.78■□□□□ 0.6
USP39-203ENST00000409470 EMC4Q5J8M3 183 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms