RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 DEFA3P59666 94 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 PSG6Q00889 435 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 GK3PQ14409 553 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 TAB1Q15750 504 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 RFTN2Q52LD8 501 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 VASNQ6EMK4 673 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LARP4Q71RC2 724 aaKnown RBP eCLIP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ZNF551Q7Z340 670 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 HIPK1Q86Z02 1210 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 CCDC103Q8IW40 242 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 CLRN3Q8NCR9 226 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 CPNE4Q96A23 557 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 DUS3LQ96G46 650 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC35A4Q96G79 324 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 AMDHD1Q96NU7 426 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SORT1Q99523 831 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 PAPOLGQ9BWT3 736 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 PRDM14Q9GZV8 571 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 MIEF1Q9NQG6 463 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 THUMPD1Q9NXG2 353 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 CAMK2AQ9UQM7 478 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LIPT1Q9Y234 373 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 DNAJC15Q9Y5T4 150 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 AKAP6Q13023 2319 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ZNF729A6NN14 1252 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SEC14L2O76054 403 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 CYP4B1P13584 511 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SDC1P18827 310 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ZP3P21754 424 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 BMP5P22003 454 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 PRPH2P23942 346 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 MPIP34949 423 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 AKR1D1P51857 326 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 OR2B6P58173 313 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 DCAF7P61962 342 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 RPL38P63173 70 aaKnown RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 GAB1Q13480 694 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 TMEM44Q2T9K0 475 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 UGT3A2Q3SY77 523 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ARL13AQ5H913 290 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 NHSL2Q5HYW2 709 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LIN54Q6MZP7 749 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC30A6Q6NXT4 461 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ZNF782Q6ZMW2 699 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 GALNT10Q86SR1 603 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LUZP2Q86TE4 346 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LYSMD2Q8IV50 215 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 DMRTC2Q8IXT2 367 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC43A2Q8N370 569 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 PLPP7Q8NBV4 271 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 OR6Q1Q8NGQ2 317 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 MAGEE2Q8TD90 523 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 NRGNQ92686 78 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 OTUB1Q96FW1 271 aaPredicted RBP8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 FCRL1Q96LA6 429 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 TSSK3Q96PN8 268 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 TRIB1Q96RU8 372 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 G6PC3Q9BUM1 346 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC22A4Q9H015 551 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 LRTM1Q9HBL6 345 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 EXD2Q9NVH0 621 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 ABCD2Q9UBJ2 740 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 POMPQ9Y244 141 aa8.75□□□□□ -1.01
NIF3L1-202ENST00000409020 GXYLT2A0PJZ3 443 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TUBAL3A6NHL2 446 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 NPIPB8E9PQR5 432 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 PIP5K1BO14986 540 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 RGS5O15539 181 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TRIM13O60858 407 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 IGKV1D-16P01601 117 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 COX5BP10606 129 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 GABRA1P14867 456 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 POU3F2P20265 443 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 CBLP22681 906 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 ELAVL4P26378 380 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 SSTR2P30874 369 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 GPC1P35052 558 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 RFX3P48380 749 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 SLC7A2P52569 658 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 ZNF136P52737 540 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TAS2R60P59551 318 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 RPP30P78346 268 aaKnown RBP8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 HSPB3Q12988 150 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 FLOT2Q14254 428 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 SSX2Q16385 188 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 HSD17B12Q53GQ0 312 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 Q5BKY6 102 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 RIPPLY2Q5TAB7 128 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 MZT2BQ6NZ67 158 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 BHLHB9Q6PI77 547 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TCTE3Q8IZS6 198 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 OR2L13Q8N349 312 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 C9orf106Q8NAJ2 232 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 OR4M2Q8NGB6 313 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 RHOXF1Q8NHV9 184 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TSPEARQ8WU66 669 aa8.74□□□□□ -1.01
NIF3L1-202ENST00000409020 TWIST2Q8WVJ9 160 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms